Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01308 ATGGTTCATCCTGGTTCGACCCAATTTTCACATAAATTGGGGATTCAAAGTGTTCATGGATGCAATAAGTTACATATTAGTGTCAAGGGAAAGGCTCGTCTACATCTTGTTACTATCGTTCCTACATCACTTGGTCTGAGGCACAATCCTGGAAGTCTTCAGCTCTTAAGGGGTGTAAGTCGCCCAATGTATCCTGTGTCTTCCAGAGCAAATGTTTTTGTGTGTCGATCTGTTCTGGAATCAGGTGGCGGAGCTGGGACTGCTGTCCTAAAATCTGCAGCTGTGGTTTTGACGAGATCTTGTGATGCCTTACGTAGCAGTCCTCTGTTACTTAAATTAATTCCAGCAGCTTGTGTCATTGCTTTTGCTGCTTGGGGTATTGGACCTCTTATGCGCTTGGGGAGGATTCTATTTCTTCATGAGCCAGATGGAAGTTGGAAGAAAAGTAGTACATACTATGTTACGACTTCTTATGTTCAACCTCTACTGCTATGGACTGGAGCTACGCTGATCTGCAGGGCATTGGATCCAGTAGTTTTACCATCGGTAGCCAGTCAGGCAGTCAAACAACGACTTCTGAATTTTGTTAGATCTTTGTCTACTGTTCTGGCATTTGCCTATTGTCTATCAAGCTTGATTCAACAAGTACAAAAGTTTGCTTATGAATCAAATGACCCAGGTGATGCAAGAAATATGGGCTTTGATTTTGCTGGGAAAGCTGTTTACACTGCAGTCTGGATTGCTGCCCTTTCATTGTTCATGGAATTGCTCGGCTTTTCTACTCAGAAGTGGCTCACTGCCGGAGGTCTCGGGACTGTATTGCTTACCCTTGCTGGTCGTGAGATATTTACTAACTTCCTTTCAAGTGTAATGATTCATGCAACACGACCGTTTGTGGTAAATGAATGGATTCAAACAAAGATTGATGGATATGAAGTATCAGGAACGGTTGAGCACGTCGGTTGGTGGTCGCCAACCATCATCCGAGGCGATGATCGTGAAGCGGTTCATATTCCAAATCACAAATTCACTGTTAGTATTGTGAGGAATCTTACCCAGAAAACTCATTGGCGTATCAAGACTCATCTTGCCATCAGCCACTTAGATGTTAATAAGATCAATTATATTGTAGCTGACATGCGCAAAGTTTTGTCCAAGAATCCTCAAGTTGAACAGCAAAGGTTACACCGTAGAATTTTTTTGGATAACGTCAATCCTGAAAACCAGGCTCTTATGATCATGGTTTCTTGCTTTGTGAAAACTTCTCGTTTTGAAGAATACCTGTGTGTCAAGGAGGCGATTCTCTTGGATCTTCTCAGAGTTATCAGCCATCATAGGGCCCGGCTCGCCACTCCTATTCGCACTGTTCAGAAAATATATGGCGAGGCTGATTTGGAGAATGTACCATTTGCTGAGACCATGTATTCTCGTTCAGGGGCTACTAACCGTCCTCTGCTTCTTATTGAGCCATCTTATAAAGTCAATGGTGATGACAAAACAAAAGTCTCTAGTCGTCCCGCTCGTTCATCAACTGAAGAAAAGGAAGCCAAACAAGAGGCAGTCTCGATGTCAGGGACAAAAGCCCCCGACACAACTGGATCAACATCAAATCTTGATATGAAAGCAGATGATAAAAAACCAATTTCTCCATCTGGTACTACACCTAAGCCTTCAGCCCCCATTCTATCAACCAGCAGTCCAGAACAAAGCAGCGCGGAAAAGCCAGTAACCAGCAATGAGATAAAAGGAGAAAAGAAAGATCTCCTGGGACTGAATTCCAAAGACAACATGCCACGAGGAACTCCGCCCAAAAGATCGCCTTCAGCTTCCAGTCCAGGGAGCGAGAAAGTTGATATTCCTTCCACAAGCTCGCAAAATAAGCAAGATGGGGAGAAGACGTCTGCATCACCATCAGTGGCGAGGCCACCATTGGAAGAGAATATTGTGCTGGGAGTTGCGTTGGAAGGTTCCAAAAGAACTCTTCCAATTGATGAAGATTTGGATTCAAAAGAAATTTCCACACAGAGGAATGGGAGTGAGTTTCCCCCCAACAGTAAAGATTTGAAAGATGGCCAAATGCCTGCCGTTCCAGGTGCGACGAAAAATGATTGA 2112 43.89 MVHPGSTQFSHKLGIQSVHGCNKLHISVKGKARLHLVTIVPTSLGLRHNPGSLQLLRGVSRPMYPVSSRANVFVCRSVLESGGGAGTAVLKSAAVVLTRSCDALRSSPLLLKLIPAACVIAFAAWGIGPLMRLGRILFLHEPDGSWKKSSTYYVTTSYVQPLLLWTGATLICRALDPVVLPSVASQAVKQRLLNFVRSLSTVLAFAYCLSSLIQQVQKFAYESNDPGDARNMGFDFAGKAVYTAVWIAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIDGYEVSGTVEHVGWWSPTIIRGDDREAVHIPNHKFTVSIVRNLTQKTHWRIKTHLAISHLDVNKINYIVADMRKVLSKNPQVEQQRLHRRIFLDNVNPENQALMIMVSCFVKTSRFEEYLCVKEAILLDLLRVISHHRARLATPIRTVQKIYGEADLENVPFAETMYSRSGATNRPLLLIEPSYKVNGDDKTKVSSRPARSSTEEKEAKQEAVSMSGTKAPDTTGSTSNLDMKADDKKPISPSGTTPKPSAPILSTSSPEQSSAEKPVTSNEIKGEKKDLLGLNSKDNMPRGTPPKRSPSASSPGSEKVDIPSTSSQNKQDGEKTSASPSVARPPLEENIVLGVALEGSKRTLPIDEDLDSKEISTQRNGSEFPPNSKDLKDGQMPAVPGATKND* 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16081857 16086913 - Chy3G062880.1 Chy03g01308 223469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01308 703 MobiDBLite consensus disorder prediction 551 577 - -
Chy03g01308 703 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 1 695 - -
Chy03g01308 703 MobiDBLite consensus disorder prediction 496 703 - -
Chy03g01308 703 Gene3D - 298 353 IPR023408 -
Chy03g01308 703 MobiDBLite consensus disorder prediction 603 635 - -
Chy03g01308 703 Gene3D - 192 296 - -
Chy03g01308 703 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 695 IPR045042 -
Chy03g01308 703 MobiDBLite consensus disorder prediction 578 592 - -
Chy03g01308 703 Pfam Mechanosensitive ion channel 239 446 IPR006685 GO:0016020|GO:0055085
Chy03g01308 703 SUPERFAMILY Sm-like ribonucleoproteins 282 352 IPR010920 -
Chy03g01308 703 MobiDBLite consensus disorder prediction 659 673 - -
Chy03g01308 703 MobiDBLite consensus disorder prediction 524 538 - -
Chy03g01308 703 MobiDBLite consensus disorder prediction 496 520 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01308 Chy-Chr3:16081857 Chy06g01600 Chy-Chr6:18425693 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01308 K22047 - csv:101213477 1357.04