Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01325 ATGGCTCCTAGTTTTGACCTTGCTGTTTCTAACCTTTTATGCGCTGAAGAGAATTGCATTTTCGATAATAACGATGGTGATGATGAAACAGTAGTTGAGGAGTTTGTGATGGCTCCTTATTATCTTAGAACTGGTCGGAATCGGAACTCTCGCCGTGACGGCGGTGGTGATGGGTTGCCGTTTATGAGCGATGAATGTTTGATTGAAATGGTTGAGAAGGAAGCCCAGCACTTGCCTGTTGATGGGTACCTTGTGAAGTTGCAAAATGGTGAGTTGGATGTTGGAGCGAGAAAAGAAGCCGTCGATTGGATTGAAAAGGTGAGTGCTCATTTCAGTTTTGGACCTCTCTGTACATACTTAGCTGTAAACTACTTGGATCGATTCCTATCCGCTTACGATCTACCTAAAGGCAAAGCTTGGACAATGCAGTTGCTTGCTGTGGCATGTATGTCCCTTGCGGCCAAATTGGAGGAGACTGAAGTCCCACTCTCTTTGGATTTACAGGTGGGTGGATCAAAATTTGTGTTCGAAGCAAGAACTATTGAAAGAATGGAGCTTTTAGTCTTGACAACACTAGGGTGGAGAATGCAAGCAGTTACACCTTTCTCGTTTATCGATCATTACCTCCACAAGATTCACGACGACAAACTCTCTATCAAAATGTCGATCGCTCGGTCTATTCATCTGCTCTTGAACATAATACAAGGGATTGATTTCTTGGAATTCAAACCATCTGAAATTGCAGCAGCTGTGGCAATATCAGTAGCTGGGGAAGCTCAACCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTATGAAGTGTCTTAAATTAATCAATGACATGTTAACATGTGGTGGTGGGTCAATGAAGGACTCGAGAGTGTCGATGTCGGAGCCCCGGAGCCCGAGCGGGGTGTTGGATGTGACATGTTTAAGCTATAAAAGCAATGATACAGCAGTTGGATCATGTGCAAATTCTTCTCATCATAACAGCTCAGAGGCTACAAAGAGGAGGAGATTGAACAGACCCTGTGAAGTGGAGCTATAG 1074 44.23 MAPSFDLAVSNLLCAEENCIFDNNDGDDETVVEEFVMAPYYLRTGRNRNSRRDGGGDGLPFMSDECLIEMVEKEAQHLPVDGYLVKLQNGELDVGARKEAVDWIEKVSAHFSFGPLCTYLAVNYLDRFLSAYDLPKGKAWTMQLLAVACMSLAAKLEETEVPLSLDLQVGGSKFVFEARTIERMELLVLTTLGWRMQAVTPFSFIDHYLHKIHDDKLSIKMSIARSIHLLLNIIQGIDFLEFKPSEIAAAVAISVAGEAQPVDPERAIPLLIQQLQMERVMKCLKLINDMLTCGGGSMKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHHNSSEATKRRRLNRPCEVEL* 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16250589 16252482 + Chy3G063050.1 Chy03g01325 223486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01325 357 MobiDBLite consensus disorder prediction 331 352 - -
Chy03g01325 357 PANTHER CYCLINS 1 349 IPR039361 -
Chy03g01325 357 Pfam Cyclin, C-terminal domain 199 292 IPR004367 -
Chy03g01325 357 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 349 - -
Chy03g01325 357 SUPERFAMILY Cyclin-like 61 196 IPR036915 -
Chy03g01325 357 Pfam Cyclin, N-terminal domain 70 196 IPR006671 -
Chy03g01325 357 SMART Cyclin_C_2 199 323 IPR004367 -
Chy03g01325 357 Gene3D - 80 197 - -
Chy03g01325 357 CDD CYCLIN 97 189 IPR013763 -
Chy03g01325 357 SUPERFAMILY Cyclin-like 182 292 IPR036915 -
Chy03g01325 357 SMART cyclin_7 102 190 IPR013763 -
Chy03g01325 357 Gene3D - 69 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00890 Chy-Chr2:5739196 Chy03g01325 Chy-Chr3:16250589 4.40E-47 dispersed
Chy03g01325 Chy-Chr3:16250589 Chy07g01733 Chy-Chr7:21018011 8.61E-59 dispersed
Chy11g00792 Chy-Chr11:11308291 Chy03g01325 Chy-Chr3:16250589 4.98E-32 transposed
Chy02g00746 Chy-Chr2:4612117 Chy03g01325 Chy-Chr3:16250589 6.70E-91 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01325 K18810 - csv:101216206 680.248