Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01354 ATGGCTGCCGCTCCTTCGGTTCGTGAGGAGAATGTTTACATGGCTAAGCTTGCCGAGCAGGCTGAGCGCTACGAGGAGATGGTCGAGTTCATGGAGAAGGTTTCCGCTTCTCTTGACAAGGAGGAACTCACCGTCGAGGAGAGAAACCTCCTTTCTGTCGCTTACAAGAACGTCATCGGCGCTCGTAGGGCCTCCTGGCGTATCATTTCCTCCATCGAACAGAAGGAGGAGAGCCGAGGTAACGATGACCATGTCTCTGTGATCCGTGACTACAGATCCAAAATTGAGACCGAACTCTCCAATATTTGCGATGGAATCCTTAAGCTTCTTGATTCTAGACTCATTCCCTCCGCTGCTTCCGGAGATTCCAAGGTTTTTTACCTCAAAATGAAGGGCGATTACCATAGATACCTTGCCGAGTTCAAAACCGGAGCCGAACGTAAGGAAGCTGCTGAAAGCACTCTCACTGCTTACAAAGCCGCTCAGTTTTCTTTATCTATGATCGCGATTAGGCAAATTTTTGTTTCTCTCTCTAATTGGAAGGATATTGCAAATGCTGAGTTGCCTCCTACACATCCGATCCGACTTGGATTGGCACTTAACTTCTCTGTATTCTATTATGAAATTTTGAATTCCCCTGATCGTGCCTGCAGTCTTGCCAAACAGGCGTTTGATGAAGCTATCGCCGAGTTGGATACCCTTGGAGAGGAATCCTACAAAGATAGTACTTTGATCATGCAGCTTCTTCGGGATAATCTCACTCTCTGGACATCGGACATGCAGGATGATGGGGCTGACGAGATTAAAGAAGCTCCACCAAAGCGTGAGGATGAAAAGCAGTGA 843 47.57 MAAAPSVREENVYMAKLAEQAERYEEMVEFMEKVSASLDKEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRDYRSKIETELSNICDGILKLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQFSLSMIAIRQIFVSLSNWKDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPPKREDEKQ* 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16443954 16445657 - Chy3G063340.1 Chy03g01354 223515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01354 280 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Chy03g01354 280 Pfam 14-3-3 protein 14 162 IPR023410 -
Chy03g01354 280 Pfam 14-3-3 protein 182 257 IPR023410 -
Chy03g01354 280 SMART 1433_4 8 270 IPR023410 -
Chy03g01354 280 Gene3D - 2 270 IPR036815 -
Chy03g01354 280 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 5 272 - -
Chy03g01354 280 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Chy03g01354 280 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Chy03g01354 280 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Chy03g01354 280 MobiDBLite consensus disorder prediction 262 280 - -
Chy03g01354 280 SUPERFAMILY 14-3-3 protein 8 259 IPR036815 -
Chy03g01354 280 Coils Coil 14 41 - -
Chy03g01354 280 ProSitePatterns 14-3-3 proteins signature 2. 239 258 IPR023409 -
Chy03g01354 280 PIRSF 14-3-3 2 269 IPR000308 -
Chy03g01354 280 MobiDBLite consensus disorder prediction 261 280 - -
Chy03g01354 280 PANTHER 14-3-3 PROTEIN 5 272 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01354 Chy04g00245 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01354 Chy-Chr3:16443954 Chy10g01053 Chy-Chr10:15730984 4.41E-125 dispersed
Chy04g00220 Chy-Chr4:1986377 Chy03g01354 Chy-Chr3:16443954 1.01E-133 transposed
Chy07g00921 Chy-Chr7:13090532 Chy03g01354 Chy-Chr3:16443954 1.55E-159 transposed
Chy03g01354 Chy-Chr3:16443954 Chy04g00245 Chy-Chr4:2195752 2.08E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01354 K06630 - csv:101220164 497.278