Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01376 ATGGGATTTCTTCAAACCCATTTTGTTTCTTCTTCCTCTGTTTTGTTTCACTCTCTGTTTTTGATCATCTTCTTTAAAGGCGTCTCTGGAGCTGGCTTTACATTTGTAAATCGATGCGATTTCACTGTTTGGCCGGGAATTCTTGGCAACCCAAAATTGGAATCCACTGGGTTCGAGCTATCTCCGGGTGCGGCGCGTTCATTTCAAGCCCCGCCTGGTTGGTCCGGCAGGTTCTGGGGTCGTACCGGCTGTTCGTTTGACCCAGCCACTGGTCAGGGCAATTGTCAAACGGCTGATTGTGGATCAAACCAAATAGAATGCAATGGCGCCGGAGCTACTCCGCCGGCGACTCTAGCCGAGTTTACAATCGGCGGAGGTGCCGGTGGGCAGGACTTTTACGATGTCAGTTTGGTCGACGGTTACAACATTCCGATGGTGGTCGATGCCACTGGTGGGAGCGGTGCGTGTCAGTCGACTGGGTGCGCGGCGGAGCTGAACCGGCGGTGTCCATCGGAGCTACGCGCTGGAGAAGGAAAGGCGTGTAGGAGCGCGTGTGAGGCGTTTGGGAACCCAGAATACTGCTGCAGCGGCGCGTATAACTCACCCGCCGCTTGTAAACCATCGATTTACTCGGAAATGTTCAAATCGGCTTGCCCTAAATCGTATAGCTATGCGTTTGATGACGCAACAAGCACTTTTACTTGTAGTGGAGCAGATTACACCATTACATTCTGCCCTTCTTCCGCAAGCCAAAAATCAGAAAGAGACCCGTCAAGCCGAGGCGACGGGCCATTTGTATCGTTTGACAGTTCATGGCTGCCGGACTTTATCACCGGAGAAGGATCATCCAAAACAATCCTTTTGTCTTCAACTTTGAATTCAACATTGTTTGTTCTTCTTTCTTTCATTCTCTTTTTTCATTAG 924 50.43 MGFLQTHFVSSSSVLFHSLFLIIFFKGVSGAGFTFVNRCDFTVWPGILGNPKLESTGFELSPGAARSFQAPPGWSGRFWGRTGCSFDPATGQGNCQTADCGSNQIECNGAGATPPATLAEFTIGGGAGGQDFYDVSLVDGYNIPMVVDATGGSGACQSTGCAAELNRRCPSELRAGEGKACRSACEAFGNPEYCCSGAYNSPAACKPSIYSEMFKSACPKSYSYAFDDATSTFTCSGADYTITFCPSSASQKSERDPSSRGDGPFVSFDSSWLPDFITGEGSSKTILLSSTLNSTLFVLLSFILFFH* 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16597191 16598902 - Chy3G063560.1 Chy03g01376 223537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01376 307 SMART tha2 33 246 IPR001938 -
Chy03g01376 307 CDD TLP-PA 33 245 - -
Chy03g01376 307 Pfam Thaumatin family 37 246 IPR001938 -
Chy03g01376 307 PANTHER OS03G0233200 PROTEIN 10 263 IPR001938 -
Chy03g01376 307 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 10 263 - -
Chy03g01376 307 Gene3D Thaumatin 31 246 IPR037176 -
Chy03g01376 307 ProSiteProfiles Thaumatin family profile. 30 246 IPR001938 -
Chy03g01376 307 SUPERFAMILY Osmotin, thaumatin-like protein 33 247 IPR037176 -
Chy03g01376 307 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Chy03g01376 307 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Chy03g01376 307 PRINTS Pathogenesis-related protein signature 131 147 IPR001938 -
Chy03g01376 307 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Chy03g01376 307 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01376 Chy04g00408 CCT
Chy03g01376 Chy04g00408 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01376 Chy-Chr3:16597191 Chy06g02236 Chy-Chr6:26453781 8.35E-120 dispersed
Chy03g01376 Chy-Chr3:16597191 Chy03g01379 Chy-Chr3:16605922 1.18E-93 proximal
Chy02g00565 Chy-Chr2:3402686 Chy03g01376 Chy-Chr3:16597191 4.08E-130 wgd
Chy03g01376 Chy-Chr3:16597191 Chy04g00408 Chy-Chr4:3652658 4.58E-92 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01376 - - csv:101204331 607.831