Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01379 ATGGCGGTGACTGGAACTCAATTTTTATTGGCCATTCTAAATCTGCTGCTGTTGGTACCGGGTGGGTTTTCGACGAGCTTTACTTTTGTGAACAAATGTGATTTCACGGTTTGGCCGGGGGTTCTGTCGAACGGCGGCGTTCCACCGCTTCTCACTACAGGCTTCTCTCTTCAGAGTGAAGAGTCCAAGACGCTACCGGCGCCGGCGTCTTGGGGCGGGCGTTTCTGGGGGAGAACACTCTGTTCTGAAGATTCCACCGGGAAATTCTCTTGCGCTACTGGCGACTGTGGCTCTAACAAATTAGAGTGTGCTGGAAACGGAGCAACCCCACCGGCTACTCTTGCGGAGTTCACTCTCGACGGCTCCGGCGGGCTTGATTTCTTCGACGTCAGTCTGGTGGACGGTTACAATCTTCCGATGATAGTTGTGCCTCAGGGTGGATCCGGCGATAACTGCACGAGTACTGGCTGTGTTGTGGATCTCAATGGTGCGTGTCCATCAGAGCTGCGCGTGATGAGTGCCGACGGAAGAGAAGGCGTCGCGTGTAAAAGCGCGTGTGGTGCTTTCAACCAACCACAGTATTGCTGCACAGGCGCGTACCAAACACCGGACACTTGTCAGCCGTCGATGTACTCTCAGATCTTCAAGAAAGCGTGCCCACGCGCATACAGCTACGCGTACGATGATAAGACGAGCACTTTCACATGCGTCAGTGCTGATTATGTCATTACATTCTGTCCATCGCCAAACACCAGGTAA 759 53.49 MAVTGTQFLLAILNLLLLVPGGFSTSFTFVNKCDFTVWPGVLSNGGVPPLLTTGFSLQSEESKTLPAPASWGGRFWGRTLCSEDSTGKFSCATGDCGSNKLECAGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMIVVPQGGSGDNCTSTGCVVDLNGACPSELRVMSADGREGVACKSACGAFNQPQYCCTGAYQTPDTCQPSMYSQIFKKACPRAYSYAYDDKTSTFTCVSADYVITFCPSPNTR* 253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16605922 16606784 - Chy3G063590.1 Chy03g01379 223540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01379 252 PANTHER BNAA02G17480D PROTEIN 15 250 - -
Chy03g01379 252 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Chy03g01379 252 CDD TLP-PA 26 246 - -
Chy03g01379 252 PANTHER OS03G0233200 PROTEIN 15 250 IPR001938 -
Chy03g01379 252 SMART tha2 27 247 IPR001938 -
Chy03g01379 252 Pfam Thaumatin family 31 247 IPR001938 -
Chy03g01379 252 PIRSF PR5 1 252 IPR001938 -
Chy03g01379 252 SUPERFAMILY Osmotin, thaumatin-like protein 26 248 IPR037176 -
Chy03g01379 252 PRINTS Pathogenesis-related protein signature 126 142 IPR001938 -
Chy03g01379 252 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Chy03g01379 252 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Chy03g01379 252 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Chy03g01379 252 Gene3D Thaumatin 25 247 IPR037176 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01379 Chy04g00409 CCT
Chy03g01379 Chy04g00409 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01379 Chy-Chr3:16605922 Chy04g00408 Chy-Chr4:3652658 5.20E-135 dispersed
Chy03g01376 Chy-Chr3:16597191 Chy03g01379 Chy-Chr3:16605922 1.18E-93 proximal
Chy02g00566 Chy-Chr2:3412098 Chy03g01379 Chy-Chr3:16605922 2.11E-86 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01379 - - csv:101204094 513.457