Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01413 ATGGATCTGCTGCGATCGGAGCCGATGCAATTGGTGCAGCTGATCATTCCTAATGAATCGGCACGACGGACGATTTCCTACCTTGGTGACCTCGGTCTATTTCAATTCAACGATCTCAATGCATCTAAAAGCCCATTCCAACGGACGTATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCTCGGAAGCTACGATTTTTCAGGGAGCAAATGACAAGGGCTGGTTTGTCGCCATCATCACATTCTTTAGGGACTCCTGATTTTGATCTGGATAATTTGGAGGTTAAACTTGGAGAATTTGAAGTAGAGTTGTTAGAGATAAAGGACAACAACGAGAAGTTACAACGCAATTATAGTGAGCTATTGGAATACAAGCTAGTGCTCCAGAAGGTTGGTGAGTTTTTTCATCTAGCTCAAAGCACAGCTGCAGCTCATCAAAGAGAACTGGAAGTGCAGCAAAACGGGGAAGGATCTATTGACACTCCCTTATTATTGGAACAAGAAATGACAACCGATCCAACGAAACAAGTTAAACTAGGATATATCAGTGGTCTAGTTCCGAGGGAAAAGTCAATGGCTTTTGAAAGGATTTTGTTTCGTTCAACTAGGGGCAATGTGTATCTGAGACAAGCTGTGATTGATGGTTCCGTTACTGATCCTGTATCTGGGGATAAGGTTGAGAAAAATGTGTTTGTCATATTTTATTCTGGAGAAAGAGCAAAGGAAAAAATTCGAAAAATATGCGAAACTTTTGGTGCAAATCGTTACCCATTCACTGATGACTTGGGCAAACAATTTCAGATGATCACAGAGGTGTCTAGAAAGCTCTCCGAATTGAAGATTACCATTGATATGGGGCAACTGCACCGAAGTCAACTCTTGCAGACGATTGGCCATCAATATGAGCTGTGGAATCTTCTGGTAAAGAAGGAAAAATCTGTTTACCACACTTTGAATATGCTCAGTGTTGATGTTACAAAGAAATGCCTTGTAGGTGAAGGATGGTGCCCCGTTTTTGCAACAATTCAGATTCAAAGTGTGATGCAGAAGGCAACCCAAGACAGCAAATCACAAATCGAGGCTATCTTTCATGTTTTGGATACAAAGGAAGCGCCACCAACATATTTCTGCACAAACAAATTTACTTCTTCGTTCCAAGAAATCGTGGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCTGGAGTCTACACTATTGTCACCTTCCCTTTCCTATTTGCTGTAATGTTTGGTGATTGGGGCCATGGAATATGCCTGTTGCTGGCAACATTATATTTTATAATAAGGGAGAAGAAATTCTCCGGCCAGAAACTTGGAGATATCGTTGAAATGACTTTTGGGGGTCGTTATGTTATCATGATGATGGCACTTTTTTCGATCTACACAGGACTGATTTACAATGAATTCTTTTCTGTCCCATTTGAACTTTTTGGGCCTTCTGCATACGGTTGTCGTGATACTTCATGCAGGGATGCTACTTCCATTGGTTTAATAAAGGTTCGTGATACATATCCATTTGGTGTGGATCCTAAGTGGCATGGCACGCGAAGTGAGTTACCTTTTCTCAACTCTTTGAAGATGAAGATGTCTATCCTACTGGGAGTAGCTCAAATGAATCTAGGAATTGTACTGAGCTACTTCAATGCAGAATTCTTTGGAGAAAGCATTAACATCTGGTACCAATTTGTTCCCCAGATGATATTTTTGAACAGCTTATTTGGTTACCTCTCACTTCTCATCATTGTAAAGTGGTACTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACTGATGATCTAGGTGAAAATCAGCTTTTCCCAGGACAGAAGTTCCTTCAGCTTCTGTTACTTCTGTCTGCCCTCACTGCCGTGCCATGGATGTTATTTCCCAAGCCTCTTCTTTTGAAGAAACAAAATGAAGAAAGGCACCAAGGACAATCCTACTCCGTACTTGACTGTACAGATGACAATCACGAAGTAGAACGACACCACGGTTCCCATGGCCATGAGGAGTTTGATTTCAGTGAGGTTTTTGTACACCAACTTATACATACCATAGAGTTTGTTCTTGGTGCAGTCTCGAACACAGCATCCTATCTTCGTCTATGGGCCCTCAGTCTAGCACATTCAGAGTTGTCGAGTGTATTTTATGACAAGGTTCTACTCTTAGCTTGGGGGTTCGATAGTTTGATCATCCGAATAGTAGGAATGGCTGTTTTCATTTTTGCAACTGTGGGAGTTCTACTAATTATGGAAACTCTAAGCGCATTCCTACACGCCTTGAGGCTCCACTGGGTGGAGTTTCAGAACAAATTCTACGCTGGAGATGGATTCAAATTTTCCCCTTTCTCCTTTTCGTTGCTCCCGGAGGAGGATGAGTGA 2427 41.78 MDLLRSEPMQLVQLIIPNESARRTISYLGDLGLFQFNDLNASKSPFQRTYAAQIKRCGEMARKLRFFREQMTRAGLSPSSHSLGTPDFDLDNLEVKLGEFEVELLEIKDNNEKLQRNYSELLEYKLVLQKVGEFFHLAQSTAAAHQRELEVQQNGEGSIDTPLLLEQEMTTDPTKQVKLGYISGLVPREKSMAFERILFRSTRGNVYLRQAVIDGSVTDPVSGDKVEKNVFVIFYSGERAKEKIRKICETFGANRYPFTDDLGKQFQMITEVSRKLSELKITIDMGQLHRSQLLQTIGHQYELWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATIQIQSVMQKATQDSKSQIEAIFHVLDTKEAPPTYFCTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIIREKKFSGQKLGDIVEMTFGGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRDTSCRDATSIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIVLSYFNAEFFGESINIWYQFVPQMIFLNSLFGYLSLLIIVKWYSGSQADLYHVMIYMFLSPTDDLGENQLFPGQKFLQLLLLLSALTAVPWMLFPKPLLLKKQNEERHQGQSYSVLDCTDDNHEVERHHGSHGHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFDSLIIRIVGMAVFIFATVGVLLIMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLPEEDE* 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 16871625 16879904 + Chy3G063930.1 Chy03g01413 223574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01413 808 PANTHER VACUOLAR PROTON ATPASES 1 808 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy03g01413 808 Pfam V-type ATPase 116kDa subunit family 27 800 IPR002490 GO:0033179|GO:0046961|GO:1902600
Chy03g01413 808 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 808 - -
Chy03g01413 808 PIRSF ATP6V0A1 1 808 IPR026028 GO:0000220|GO:0046961
Chy03g01413 808 Coils Coil 90 124 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01306 Chy-Chr11:19304033 Chy03g01413 Chy-Chr3:16871625 0 transposed
Chy01g00757 Chy-Chr1:5656055 Chy03g01413 Chy-Chr3:16871625 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01413 K02154 - csv:101209817 1558.12