Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01433 ATGGCGACACCTGTTGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAACATTACTATTCAATGTGGCAGACATTGTTCGAGATTGATACTAAATATGTACCTATCAAGCCTATTGGTCGAGGGGCATACGGTATTGTGTGTTCTTCTGTGAATAGGGAAACAAATGAGAAAGTTGCAATAAAGAGAATACATAATGCGTTTGAGAATCGTATCGATGCACTCCGGACTTTGCGGGAACTGAAGCTCCTTAGGCATCTTCGCCACGAAAACGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTCAAAGATGTCTATTTGGTTTATGAACTGATGGATACTGATCTGCATCAGATTATTAAGTCTTCTCAAACTCTTACCAATGACCATTGCCAATATTTCCTCTTTCAGTTGCTCCGAGGCCTAAAGTATCTGCATTCTGCAAACATTCTACATCGGGACTTGAAACCGGGGAACCTTCTTGTCAATGCAAATTGTGATCTTAAGATATGTGATTTTGGTTTAGCACGTACGAGCAATGGGAAGAATCAATTTATGACCGAGTACGTCGTAACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGTGAGAATTACGGGACGTCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCTGAGCTTCTCGGTAGGAAACCTATCTTCCCTGGTACAGAATGTTTGAATCAACTCAAATTGATAATTAACCTACTGGGAAGCCAGAGAGAGGAAGATCTTGAGTTCATAGACAATCCAAAGGCAAGGAGGTATATAAAATCCCTTCCATACTCTCCTGGAGCTCCTCTTTCCCGTCTTTATCCGAGCGCTCATCCTCTCGCAATTGATCTGCTACAAAAGATGCTTGTCTTTGACCCATCAAAAAGGATTAGTGTAACTGAGGCATTACAGCATCCTTATATGTCCCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTGCCAATCGATCTTGAGATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCCGAAGACCTGGAAGAACACACAGAAATGACACGTTTCCACCCCGAACCTACTACAAGTAGCGCCGCAGTGTATTCTTAA 1161 42.81 MATPVEPPNGVRSQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINLLGSQREEDLEFIDNPKARRYIKSLPYSPGAPLSRLYPSAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLEIDEELGEEMIREMMWKEMLHYHPEDLEEHTEMTRFHPEPTTSSAAVYS* 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17007158 17009836 - Chy3G064130.1 Chy03g01433 223594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01433 386 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01433 386 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Chy03g01433 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Chy03g01433 386 CDD STKc_TEY_MAPK 26 361 - -
Chy03g01433 386 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Chy03g01433 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Chy03g01433 386 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Chy03g01433 386 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01433 386 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Chy03g01433 386 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Chy03g01433 386 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01433 386 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01433 Chy-Chr3:17007158 Chy07g01255 Chy-Chr7:17267359 0 dispersed
Chy03g01433 Chy-Chr3:17007158 Chy11g01662 Chy-Chr11:23088308 1.76E-153 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71146 PF00069 Pkinase 2.30E-71 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01433 K20535 - csv:101213478 768.844