Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01495 ATGTCCTCCATTGTCATTCCTTCTCTTCAACCTCACTTGCGATTCCCATCGTCGAAAGAAACGACTCAAAGATCTCGTTCTAGAGTTGGGTTTGTTTCCACACGTCCAATCGTCTACGCCGCCGACGGAGTTTCTTCATCGTCTTCTTCCTCTCTTCAAGTGCCGCAGCGGATTGTTTCGCCGCCGGAACCCATCAAGCTTCCTTTGAGGAAGATTCCTGGTGATTATGGGCCGCCGATGTTTGGGGCCTTGAAGGATAGACAAGATTATTTCTATAATCAGGGAAGGGAAGAGTATTTGAAATCTCGAATGCTCCGGTATGAATCTACTGTGTATAGAACTAATATGCCACCGGGTCCATTTATCACTTCTGATTCCCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGATCATTCTAAAGTTGAGAAGAAAGATCTCTTCACCGGAACTTACATGCCCGTAACAGAGCTCACCGGCGGTTACAGGGTGCTTTCTTATATTGACCCATCTGAGCCCGATCACGCTAAGCTTAAACAGTTGATTTTCTTTCTCCTCAAGCACCGCCGGGATAAAATTTTGCCGGAATTTCACTCTACTTTTTCTGAGCTATTCGAGACTCTGGAAAAGGATTTGGCTGCTTCTGGTAGAGCAGAGTACAATGCTACCGGTGAACAAGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCTGATCCGGTAGATTCCAAACTAGGTCGTGACGCCCCGAAATTGATAGCGAAATGGGTCTTGTTCCAGCTTGGCCCTGTTCTGAGTCTCGGCCTCCCCAAGGTCGTCGAGGAGCTTCTACTCCGCACGGTCCGGCTCCCCCCGGCGTTGATCAAAGCCGATTACCGGCGGTTGTACGAATTCTTTTACAAGTCGTCGGAGGCGGTGTTTGAGGAGGCGGATAGATTGGGAATTTCGAGGGAAGAAGCTTGTCACAACTTGCTATTCACAACTTGTTTTAATTCATTTGGAGGGATGAAGATCTTTTTCCCCAACATGATCAAATGGATCGGCCGAGCCGGAGTAAATCTCCACACCCGACTAGCACGGGAGATTCGTACTGCCGTAAAAGCCAACGGCGGGAAAATCACGATGGGTGCCATGGAACAGATGCCGCTGATGAAATCAGTAGTGTACGAAGCGTTCAGAATCGAGCCACCGGTTCCGGTTCAGTACGGTCGAGCGAAGAAAGACCTTGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGAGAAGTGATCTGTGGGTATCAACCATTCGCAACAAGAGATCCAAAAATCTTCGACAGAGCCGACGAGTTCGTACCTGATCGGTTCACAGGCGACGGTGAGGAGCTGCTAAAACACGTTCTATGGTCAAACGGACCGGAAACTCAATCACCGTCGGTTCAGAACAAGCAGTGCGCAGGAAAAGACTTCATCGTCTTCATCTCTCGGCTTATGGTGGTTGAACTTTTCCTCCGGTACGACTCCTTCGACATCGAAGCCTCAAACACTCCGTTAGGTGCCGCCGTCACCGTAACTTCCCTAAAGAAAGCAAGTTTCTGA 1599 49.09 MSSIVIPSLQPHLRFPSSKETTQRSRSRVGFVSTRPIVYAADGVSSSSSSSLQVPQRIVSPPEPIKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDHSKVEKKDLFTGTYMPVTELTGGYRVLSYIDPSEPDHAKLKQLIFFLLKHRRDKILPEFHSTFSELFETLEKDLAASGRAEYNATGEQAAFNFLARSLFGADPVDSKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTVRLPPALIKADYRRLYEFFYKSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTRLAREIRTAVKANGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLKHVLWSNGPETQSPSVQNKQCAGKDFIVFISRLMVVELFLRYDSFDIEASNTPLGAAVTVTSLKKASF* 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17343298 17344896 + Chy3G064750.1 Chy03g01495 223656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01495 532 PANTHER ALLENE OXIDE SYNTHASE, CHLOROPLASTIC 53 529 - -
Chy03g01495 532 PRINTS E-class P450 group IV signature 386 402 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g01495 532 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g01495 532 PRINTS E-class P450 group IV signature 485 503 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g01495 532 Pfam Cytochrome P450 361 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g01495 532 PANTHER CYTOCHROME P450 26 53 529 - -
Chy03g01495 532 SUPERFAMILY Cytochrome P450 67 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy03g01495 532 Gene3D Cytochrome P450 63 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00010 Chy-Chr1:81273 Chy03g01495 Chy-Chr3:17343298 0 dispersed
Chy01g00011 Chy-Chr1:88100 Chy03g01495 Chy-Chr3:17343298 1.61E-179 dispersed
Chy01g00445 Chy-Chr1:3187425 Chy03g01495 Chy-Chr3:17343298 2.65E-129 dispersed
Chy03g01495 Chy-Chr3:17343298 Chy12g01222 Chy-Chr12:16943230 4.81E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01495 K01723 - csv:101221732 1039.25