Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01508 ATGCCTTCCTTTAACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGTACCTGATTCTGATTTTTTTCTTTTTTCTGTTGGTCTACCGGAACCGTTTGTTCAGCGGCGACTTACCAGACAGAGGAAGCTCCGGCATCTTACGGATCGAGACGTTGGCTTTGAACACCCCCGATCGCTTCCTGATTCACCTGATATATCGGCAAAACCTAAATCGCCTCTTGGGGGTTCTGAACGTTGGTCCTCCTCACCTTTGCCCCAGCCTTTGCCGTTGCCGGAGCTCTTTCCGGTTCGGAGCCCGGAGTCCGGTTCTTGGAATCATGGTCAAGGGCGTGTTGGATCGCCTGTTGAAACTTCGGTCCGGAAGTGCTCTGATCATGCGACAACGAATGTAAGTAGAAGTTTTGGGCACAATCAAAGGCGGGTTGCTACAGATTTGACCTTGGAAGTTGTTGATGGCAATTCAAGAGGGACTGGGGCTACCGCATTTACGAGCCCTCAAAGTCTCTCAGCGAATTCAGGGAAATTGAATCCGAATAAGGAGTTTCTTTTTGGTTGTTCGGATCAAACTCCAAACAACAAAGGCAGGGGATCCCCTACGCATCCAAGTGCTGAAAGGGGTAACTACAATTTGACACCTAAGAAATCGTCGTCAAAGAGTGCACCAACGAGCATTTTACCGAGTCCTGTTGTTAGCCCACGAAAATCATATAATGGAAATCATTTTGTTCCTGGGTTGAGTCACCATGAACATCAGGAATCTCCTTCCAATAATTCTCCTAAAGTACCACCCCTTAAAACTGCACTTAGTTCTCAACCCTTTCCTCTCCATAGTCCGACAGCTCGAAGTTCCATAAGCAATTCCCGATCTCCTAACGATATGTCATTTCCCCTGCATACTAAGTTACAAAAAGATAATAGCATAGATCGGTCTGAAAGCCATGCTCATGTCAATGCCCACCCGTTGCCCCTTCCTCCTCCATTAGTGGCCTCTTCACAAGCGTCTGCACAGTCTCTTCCGTCAAATGTTCATCATGTTATTGAGAAGCCATTCATTTCATCAATGAAAGGTCAGTGGCAAAAAGGAAAGCTAATTGGGCGTGGTACGTTTGGAAGTGTTTATCTTGCTACCAACAGAGAAACTGGAGCTTTATGTGCAATGAAAGAAGTTGATCTCATTCCTGATGATCCTAAATCTGCTGAATGCATAAAGCAACTAGAGCAGGAAATTGAAGTTCTTAGTCATCTTAAACATCCGAATATTGTACAGTATTATGGAAGTGAAATAATTGGCGATTGTTTCTATATATATTTGGAATACGTTTATCCTGGGTCAATAAATAAATATGTCCGTGAACGTTGTGGAGCCATTACTGAATCTATTGTTCGCAATTTCACTCGCCATATTCTATCTGGACTGGCTTACTTGCATAGCACAAAAACAATTCACAGAGATATCAAAGGTGCAAACTTGCTCGTTGATTCATCAGGCGTCGTCAAACTTGCCGATTTTGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCATACTGGATGGCCCCGGAGGTCATAAAAGCTGCAATGTTGAAAGATGCCAACCCTGATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGAATGGAAAACCTCCGTGGTGTGAGTTTGAAGGGCATCAAGTTATGTTCAAGGTGTTGAATAAAACCCCACCTATCCCAGAAAAGCTATCTCCTGAAGGGAAAGACTTCCTCCAGTGTTGCTTTCAGAGGAATCCAGCTGACAGACCAACTGCCATGGTGCTCCTTGACCATCCTTTCTTAAGATCCTCAAGTGACTCAAATGTTTTGATCCCAACGTCAGCATTTTCAACCATGAATCTCTTGGAAAAATTGTTGAGTCCGAAGGATCCCCTTAATCCTAAAGGAGACCAGGCACAAAACTCTTCTGGAACTTTGACTTCAAATGATTATTTGTCGTGCCGTAGTTCTTGTAAGTTTTCCTTGCAACTGACTCCTATTGTTAACCAAATCACAGCCCTTCAACAAACATTTCAAGCAATGTTCCTGCAAGTGCAGTCGCCAACCACCACTTTTCTATTTCAAGGACTCATAAAAGGGAAGTGCCGCACCTCTGAGCTATGGTTGTGGACATTTACAGGCAAATACTCGACTGAGGAAGTTACCCATCCTCCACTTAAGGCCGCTAGAGGCTGGGATAGAGTTCATTTTCCCCCCTGA 2274 44.42 MPSFNKSASNSRLQQKVPDSDFFLFSVGLPEPFVQRRLTRQRKLRHLTDRDVGFEHPRSLPDSPDISAKPKSPLGGSERWSSSPLPQPLPLPELFPVRSPESGSWNHGQGRVGSPVETSVRKCSDHATTNVSRSFGHNQRRVATDLTLEVVDGNSRGTGATAFTSPQSLSANSGKLNPNKEFLFGCSDQTPNNKGRGSPTHPSAERGNYNLTPKKSSSKSAPTSILPSPVVSPRKSYNGNHFVPGLSHHEHQESPSNNSPKVPPLKTALSSQPFPLHSPTARSSISNSRSPNDMSFPLHTKLQKDNSIDRSESHAHVNAHPLPLPPPLVASSQASAQSLPSNVHHVIEKPFISSMKGQWQKGKLIGRGTFGSVYLATNRETGALCAMKEVDLIPDDPKSAECIKQLEQEIEVLSHLKHPNIVQYYGSEIIGDCFYIYLEYVYPGSINKYVRERCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVIKAAMLKDANPDLALAVDIWSLGCTIIEMLNGKPPWCEFEGHQVMFKVLNKTPPIPEKLSPEGKDFLQCCFQRNPADRPTAMVLLDHPFLRSSSDSNVLIPTSAFSTMNLLEKLLSPKDPLNPKGDQAQNSSGTLTSNDYLSCRSSCKFSLQLTPIVNQITALQQTFQAMFLQVQSPTTTFLFQGLIKGKCRTSELWLWTFTGKYSTEEVTHPPLKAARGWDRVHFPP* 758
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17409966 17413850 + Chy3G064880.1 Chy03g01508 223669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01508 757 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 675 - -
Chy03g01508 757 SMART serkin_6 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01508 757 Pfam Protein kinase domain 360 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01508 757 PANTHER - 1 675 - -
Chy03g01508 757 MobiDBLite consensus disorder prediction 250 302 - -
Chy03g01508 757 MobiDBLite consensus disorder prediction 157 235 - -
Chy03g01508 757 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Chy03g01508 757 Gene3D Transferase(Phosphotransferase) domain 1 356 645 - -
Chy03g01508 757 MobiDBLite consensus disorder prediction 49 119 - -
Chy03g01508 757 MobiDBLite consensus disorder prediction 153 335 - -
Chy03g01508 757 SUPERFAMILY Protein kinase-like (PK-like) 354 635 IPR011009 -
Chy03g01508 757 ProSiteProfiles Protein kinase domain profile. 359 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01508 Chy-Chr3:17409966 Chy09g01038 Chy-Chr9:12879506 1.66E-105 dispersed
Chy08g00283 Chy-Chr8:6544227 Chy03g01508 Chy-Chr3:17409966 3.98E-37 transposed
Chy02g00925 Chy-Chr2:6095744 Chy03g01508 Chy-Chr3:17409966 1.55E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71148 PF00069 Pkinase 2.10E-67 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01508 - - csv:101219854 1295.03