Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01545 ATGGACGGTGGTGATGGGACTGTGAGGCTTGGAGCTGTGAACTTGAAGCCGGATCGGAACGCTTTTGATTTAGGTCCTGATGTCTCTGTTTCGTCTCCGGTGACACGGCAGAAAGCCGCTGCTGCTAAACAGTTCATTGAGAATCATTACAAGAACTATCTCCAAGGTCTTCAGGATCGAAAAGATAGACGGAGAACGCTTCAACGAAGAGCGCAAGAAGCGCAGATGTCGGTTGAAGAACAGGAAGAGATGTTGAGGAACTTGGAACGCAGAGAAACAGAATTTATGAGACTGCAAAGACGTAAAGTTGGAATCGATGACTTTGAACAATTAACAGTTATTGGCAAAGGTGCATTCGGCGAGGTTAGATTGTGTCGTGCAAAAGGAACTGGGGAAATTTTTGCCATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCTGAGAGGAATTTACTTGCAGAGGTTGATAGTCGGTGCATTGTAAAACTCTTTTATTCTTTTCAAGATTCTGAATTCTTGTACCTTATTATGGAGTATTTACCTGGTGGTGACATTATGACATTGCTAATGAGAGAAGACATTCTGTCAGAGGATGTTGCTCGGTTTTACATAGCAGAGAGCATTTTAGCTATTCATTCAATTCATCAGCACAATTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAAAATGGCCATCTCAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTGAATGATGAAGACCTAACCACCCAGCAGTGCAAAAATGAAGGTCAAAGTCAGTCTGACTCTAATGGATCCCATTGGATGATGCCAAAAGAACAAATTCAGCAGTGGAAGCGTAATCGTCGTGCACTGGCCTTTTCAACTGTTGGGACTCTGGATTATATGGCACCTGAAGTACTCCTTAAGAAAGGATACGGAATGGAGTGTGATTGGTGGTCATTAGGGGCCATTATGTATGAGATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACTTTCCGTAAGATAATAAATTGGAGAACTTGCCTGAAATTTCCCGAGGACCCAAAAATCTCGGAGGAAGCTAAGGACCTGATCAGCCACTTGCTTTGTGATGTTGAAACAAGGTTGGGAACAAGAGGAGTAGAAGAAATAAAGTCACATCCATGGTTCAAAGGCATTCAGTGGGATAAGCTGTATGAAATGGAAGCTGCATACAAACCAACTGTCACTGGAGAACTAGACACTCAGAACTTTGAGAAGTTTCCTGAAGTTCAAGACCCTCCCTCAGAAATGCCAACTGTTGGACCTTGGAGGAAGATGCTTACTTCAAAGGATACCAATTTCATTGGATTTACTTTTAAGAAATCAAACGTCAAATCACTTGAGACTACAGGTACATATATACATTCAAACACGTCATCAAAATCACCATCTCTAGTTTCGTTGTTGGATCGAATAGACTTGCAAGAGACTGTGATACCAGAAGTTGAACAAAAGCAGGAAGCATAA 1572 41.73 MDGGDGTVRLGAVNLKPDRNAFDLGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKDRRRTLQRRAQEAQMSVEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEIFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESILAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTTQQCKNEGQSQSDSNGSHWMMPKEQIQQWKRNRRALAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEDPKISEEAKDLISHLLCDVETRLGTRGVEEIKSHPWFKGIQWDKLYEMEAAYKPTVTGELDTQNFEKFPEVQDPPSEMPTVGPWRKMLTSKDTNFIGFTFKKSNVKSLETTGTYIHSNTSSKSPSLVSLLDRIDLQETVIPEVEQKQEA* 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17622656 17627193 - Chy3G065250.1 Chy03g01545 223706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01545 523 ProSiteProfiles Protein kinase domain profile. 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01545 523 ProSiteProfiles AGC-kinase C-terminal domain profile. 412 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy03g01545 523 Pfam Protein kinase domain 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01545 523 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Chy03g01545 523 Coils Coil 57 101 - -
Chy03g01545 523 CDD STKc_NDR_like 106 475 - -
Chy03g01545 523 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 509 - -
Chy03g01545 523 Gene3D Phosphorylase Kinase; domain 1 430 440 - -
Chy03g01545 523 Gene3D Transferase(Phosphotransferase) domain 1 192 259 - -
Chy03g01545 523 SMART pkinase_C_6 412 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Chy03g01545 523 Gene3D Transferase(Phosphotransferase) domain 1 310 429 - -
Chy03g01545 523 Pfam Protein kinase C terminal domain 430 474 IPR017892 GO:0004674|GO:0005524|GO:0006468
Chy03g01545 523 SUPERFAMILY Protein kinase-like (PK-like) 85 463 IPR011009 -
Chy03g01545 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Chy03g01545 523 Gene3D Phosphorylase Kinase; domain 1 77 191 - -
Chy03g01545 523 SMART serkin_6 108 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01545 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01246 Chy-Chr2:9075709 Chy03g01545 Chy-Chr3:17622656 0 dispersed
Chy03g01545 Chy-Chr3:17622656 Chy05g00316 Chy-Chr5:3138712 0 dispersed
Chy03g01545 Chy-Chr3:17622656 Chy07g00261 Chy-Chr7:2059432 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71149 PF00069 Pkinase 7.10E-65 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01545 K08790 - csv:101222805 1040.02