Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01549 ATGAATTTCAAAGATTTTGGGAATGACCCATCTGGCGGGAACGGAGGCGGAGGTGGAAGGCCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCAATGACCTTCGATGAGTTTCAAAGCATGGGGAGTATAGGAAAGGACTTTGGGTCAATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACAATGGCATCTTCTGCTGCTGCTGTTGGTAAAGAAGGGGGTGGTAGTGCTGGTGGTAGTAGTGGTTATTTGCAGAGACAGGGGTCTTTGACGCTGCCTCGAACACTCAGCCAGAAGAAGGTGGATGAGGTATGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGACGGGGCTGCCCTTGCTCCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGGTGACCCTGGAAGAGTTTTTACTCAGAGCTGGAGTGGTGAGAGAGGATACTCAAGTGACAGCAAACCCCAACAATGGAGGGTTCTTCGGCAATAATACCGGTTTTGGAATTGCTTTTCAGCGGCAGCCGAAAGTTCCTGAGAATAACAATCACATTCAGATTCAATCGTCGAACTTATCGCTGAATGCCAATGGAGTTCGAGCACATCAGCCGCAGCCAATATTTCCAAAGCAGGCGACTTTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGTTAGTCCAGGAATTAGAGGTGGAATTATGGGGATTGCAGATCAAGGGCTGAATACAAATTTGATGCAAGGCTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTCAATATAGCAGCTGCTCCGTTACCTATTGCCACAGAATCGCCAGGGAACCAACTATCCTCTGATGGAATCGGAAAGAGCAATGGTGATACCTCTTCAGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGGGGGCGGAGAGGTAATGGGATTGTCGACAAAGTTGTTGAGAGGAGGCAACGGAGAATGATTAAAAACAGAGAGTCTGCTGCAAGATCACGGGCGCGAAAGCAGGCTTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAGAAACAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAATGGATAAGCAACAAGGAATCAAGAAGCGATGTTTAAGACGAACGCAGACTGGCCCATG 1232 47.97 MNFKDFGNDPSGGNGGGGGRPPANYPLARQSSIYSMTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAVGKEGGGSAGGSSGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHASAKDGAALAPNLQQRQQTLGEVTLEEFLLRAGVVREDTQVTANPNNGGFFGNNTGFGIAFQRQPKVPENNNHIQIQSSNLSLNANGVRAHQPQPIFPKQATLTYGSQLALPSDGQLVSPGIRGGIMGIADQGLNTNLMQGSALQGGRMGVVNIAAAPLPIATESPGNQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRGNGIVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVMDKQQGIKKRCLRRTQTGPX 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17666168 17668972 + Chy3G065290.1 Chy03g01549 223710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01549 411 Pfam bZIP transcription factor 333 385 IPR004827 GO:0003700|GO:0006355
Chy03g01549 411 CDD bZIP_plant_BZIP46 333 385 - -
Chy03g01549 411 SUPERFAMILY Leucine zipper domain 333 381 IPR046347 GO:0003700|GO:0006355
Chy03g01549 411 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 336 351 IPR004827 GO:0003700|GO:0006355
Chy03g01549 411 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 331 382 IPR004827 GO:0003700|GO:0006355
Chy03g01549 411 Coils Coil 349 386 - -
Chy03g01549 411 MobiDBLite consensus disorder prediction 287 311 - -
Chy03g01549 411 Gene3D - 331 388 - -
Chy03g01549 411 SMART brlzneu 329 393 IPR004827 GO:0003700|GO:0006355
Chy03g01549 411 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 199 410 IPR043452 GO:0003700|GO:0045893
Chy03g01549 411 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 5 174 IPR043452 GO:0003700|GO:0045893
Chy03g01549 411 MobiDBLite consensus disorder prediction 287 315 - -
Chy03g01549 411 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 5 174 - -
Chy03g01549 411 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 199 410 - -
Chy03g01549 411 MobiDBLite consensus disorder prediction 1 27 - -
Chy03g01549 411 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01358 Chy-Chr2:10145980 Chy03g01549 Chy-Chr3:17666168 2.09E-11 dispersed
Chy03g01549 Chy-Chr3:17666168 Chy04g01934 Chy-Chr4:25267969 6.38E-56 dispersed
Chy06g02250 Chy-Chr6:26547626 Chy03g01549 Chy-Chr3:17666168 3.35E-17 transposed
Chy01g00061 Chy-Chr1:447463 Chy03g01549 Chy-Chr3:17666168 2.44E-106 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17751 PF00170 bZIP_1 3.80E-13 CL0018 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01549 K14432 - csv:101223043 727.628