Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01554 ATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCTCTTCAGTCGAGGGTTGCTTCGGGTTTTCGTGCCTGTGATGATGGCTTTAGGAATCCTGCACTCTATCAGAGACGTGCACCGATCACCAATTATTCCAATGTTGCATTTCAATATCCTGCTGTGCAATCCTGTGTAGCTACAACTGACCTTTCTAGGGTTGCCTCAACCGCTTCCCCCATTTTTGTTGCTGCCCCTGCTGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAGCGTGTCAAACTCTTAATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTTAAGCGCACAATCCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCCGGTGGTGCAGCTGGTGCTTCATCTCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACTCGATTGGCCAACGACGCCAAAGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAACGGACTGGTTGATGTCTACAGGAAGACATTACAGTCTGATGGTGTTGCTGGTCTATATCGTGGGTTTAACATTTCTTGCGTTGGTATCATCGTGTACCGAGGTTTATACTTTGGAATGTACGATTCTCTAAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGTTGGCTCATCACGAACGGTGCCGGTCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAAGCTTGAGCCGCGGCAAACTCCTCCCAGTTTCCCTCGCGGCCATCAGTTTTCTCCTAAGGGAAGAAGTAGCCATGGCTGATCAGGGTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGGGCTTGTGATGATGGCTTTAGAAATCCTGCACTCTATCAGAGACGTGCACCGATCACCAATTATTCCAATGTTGCATTTCAATATCCTGCTGTGCAATCTTGTGTAGCTACAACTGACCTTTCTAGGGTTGCCTCAACTGCATCCCCCATTTTTGTTGCTGCCCCTGCAGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAGCGTGTCAAACTCTTAATTCAAAATCAAGATGAGATGATTAAATCTGGACGTTTGGCTGAGCCATATAAGGGTATTGGTGATTGTTTTAAGCGCACAATCCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTTAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTTGCATCCGGAGGTGCAGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCTAATGACGCCAAAGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTGTTGCTGGTCTATATCGTGGGTTTAACATTTCTTGCGTTGGTATCATCGTGTACCGAGGCTTATACTTTGGAATGTACGATTCTCTAAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGTTGGCTCATCACGAACGGTGCCGGTCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGGGCTAACATTCTCCGTGCCGTCGCAGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAA 2328 46.69 MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAPITNYSNVAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGDRLREEIRIWWRLSLSRGKLLPVSLAAISFLLREEVAMADQGQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAPITNYSNVAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLAEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA* 776
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 17708965 17715437 + Chy3G065340.1 Chy03g01554 223715
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01554 775 Pfam Mitochondrial carrier protein 192 288 IPR018108 -
Chy03g01554 775 Pfam Mitochondrial carrier protein 577 673 IPR018108 -
Chy03g01554 775 Pfam Mitochondrial carrier protein 678 763 IPR018108 -
Chy03g01554 775 Pfam Mitochondrial carrier protein 474 570 IPR018108 -
Chy03g01554 775 Pfam Mitochondrial carrier protein 293 348 IPR018108 -
Chy03g01554 775 Pfam Mitochondrial carrier protein 89 185 IPR018108 -
Chy03g01554 775 Gene3D Mitochondrial carrier domain 91 353 IPR023395 -
Chy03g01554 775 Gene3D Mitochondrial carrier domain 476 771 IPR023395 -
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 578 670 IPR018108 -
Chy03g01554 775 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 2 349 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 SUPERFAMILY Mitochondrial carrier 473 760 IPR023395 -
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 678 764 IPR018108 -
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 473 566 IPR018108 -
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 93 106 IPR002067 GO:0055085
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 156 176 IPR002067 GO:0055085
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 302 324 IPR002067 GO:0055085
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 106 120 IPR002067 GO:0055085
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085
Chy03g01554 775 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 293 387 IPR018108 -
Chy03g01554 775 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 387 775 - -
Chy03g01554 775 PRINTS Adenine nucleotide translocator signature 90 102 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PRINTS Adenine nucleotide translocator signature 134 155 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PRINTS Adenine nucleotide translocator signature 193 206 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PRINTS Adenine nucleotide translocator signature 298 314 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PRINTS Adenine nucleotide translocator signature 167 179 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 387 775 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Chy03g01554 775 PANTHER ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE 2 349 - -
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 285 IPR018108 -
Chy03g01554 775 SUPERFAMILY Mitochondrial carrier 88 349 IPR023395 -
Chy03g01554 775 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 181 IPR018108 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00316 Chy-Chr1:2259542 Chy03g01554 Chy-Chr3:17708965 5.03E-166 dispersed
Chy03g01554 Chy-Chr3:17708965 Chy12g01477 Chy-Chr12:18680921 1.55E-112 dispersed
Chy03g01554 Chy-Chr3:17708965 Chy08g00635 Chy-Chr8:14257997 1.30E-25 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01554 K05863 - csv:101203733 745.732