Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy03g01554 | ATGGCTGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCTCTTCAGTCGAGGGTTGCTTCGGGTTTTCGTGCCTGTGATGATGGCTTTAGGAATCCTGCACTCTATCAGAGACGTGCACCGATCACCAATTATTCCAATGTTGCATTTCAATATCCTGCTGTGCAATCCTGTGTAGCTACAACTGACCTTTCTAGGGTTGCCTCAACCGCTTCCCCCATTTTTGTTGCTGCCCCTGCTGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAGCGTGTCAAACTCTTAATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTTAAGCGCACAATCCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCCGGTAACCTGGCATCCGGTGGTGCAGCTGGTGCTTCATCTCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACTCGATTGGCCAACGACGCCAAAGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAACGGACTGGTTGATGTCTACAGGAAGACATTACAGTCTGATGGTGTTGCTGGTCTATATCGTGGGTTTAACATTTCTTGCGTTGGTATCATCGTGTACCGAGGTTTATACTTTGGAATGTACGATTCTCTAAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGTTGGCTCATCACGAACGGTGCCGGTCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAAGCTTGAGCCGCGGCAAACTCCTCCCAGTTTCCCTCGCGGCCATCAGTTTTCTCCTAAGGGAAGAAGTAGCCATGGCTGATCAGGGTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGGGCTTGTGATGATGGCTTTAGAAATCCTGCACTCTATCAGAGACGTGCACCGATCACCAATTATTCCAATGTTGCATTTCAATATCCTGCTGTGCAATCTTGTGTAGCTACAACTGACCTTTCTAGGGTTGCCTCAACTGCATCCCCCATTTTTGTTGCTGCCCCTGCAGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCAATTGAGCGTGTCAAACTCTTAATTCAAAATCAAGATGAGATGATTAAATCTGGACGTTTGGCTGAGCCATATAAGGGTATTGGTGATTGTTTTAAGCGCACAATCCAAGAGGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTTAAGGATTACTTCAAGAGACTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTTGCATCCGGAGGTGCAGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCTAATGACGCCAAAGCTGCCAAGAAGGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTGTTGCTGGTCTATATCGTGGGTTTAACATTTCTTGCGTTGGTATCATCGTGTACCGAGGCTTATACTTTGGAATGTACGATTCTCTAAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGTTTCTTCGCTAGCTTTGCCCTTGGTTGGCTCATCACGAACGGTGCCGGTCTTGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTGAAGTACAAGAGCTCAATGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGGGCTAACATTCTCCGTGCCGTCGCAGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATCGTCTTCGGGAAGAAATACGGATCTGGTGGCGCTTAA | 2328 | 46.69 | MADQVQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAPITNYSNVAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGDRLREEIRIWWRLSLSRGKLLPVSLAAISFLLREEVAMADQGQHPTIYQKVAGQLSLQSRVASGFRACDDGFRNPALYQRRAPITNYSNVAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLAEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA* | 776 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 17708965 | 17715437 | + | Chy3G065340.1 | Chy03g01554 | 223715 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 192 | 288 | IPR018108 | - | |
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 577 | 673 | IPR018108 | - | |
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 678 | 763 | IPR018108 | - | |
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 474 | 570 | IPR018108 | - | |
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 293 | 348 | IPR018108 | - | |
| Chy03g01554 | 775 | Pfam | Mitochondrial carrier protein | 89 | 185 | IPR018108 | - | |
| Chy03g01554 | 775 | Gene3D | Mitochondrial carrier domain | 91 | 353 | IPR023395 | - | |
| Chy03g01554 | 775 | Gene3D | Mitochondrial carrier domain | 476 | 771 | IPR023395 | - | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 578 | 670 | IPR018108 | - | |
| Chy03g01554 | 775 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 2 | 349 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | SUPERFAMILY | Mitochondrial carrier | 473 | 760 | IPR023395 | - | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 678 | 764 | IPR018108 | - | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 473 | 566 | IPR018108 | - | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 302 | 324 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | PRINTS | Mitochondrial carrier protein signature | 258 | 276 | IPR002067 | GO:0055085 | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 293 | 387 | IPR018108 | - | |
| Chy03g01554 | 775 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 387 | 775 | - | - | |
| Chy03g01554 | 775 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PRINTS | Adenine nucleotide translocator signature | 298 | 314 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 387 | 775 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Chy03g01554 | 775 | PANTHER | ADP,ATP CARRIER PROTEIN 1, MITOCHONDRIAL-LIKE | 2 | 349 | - | - | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 285 | IPR018108 | - | |
| Chy03g01554 | 775 | SUPERFAMILY | Mitochondrial carrier | 88 | 349 | IPR023395 | - | |
| Chy03g01554 | 775 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g00316 | Chy-Chr1:2259542 | Chy03g01554 | Chy-Chr3:17708965 | 5.03E-166 | dispersed | |
| Chy03g01554 | Chy-Chr3:17708965 | Chy12g01477 | Chy-Chr12:18680921 | 1.55E-112 | dispersed | |
| Chy03g01554 | Chy-Chr3:17708965 | Chy08g00635 | Chy-Chr8:14257997 | 1.30E-25 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy03g01554 | K05863 | - | csv:101203733 | 745.732 |