Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01555 ATGTCTAATTATGCCTTCTTGAATGACCAGCTCTCGAAGCGGACCTCCATTTTCGGTTTGCGTTTGTGGGTTGTTTTGGGTATTTGTGTTGGTGCTGCCATTGTTATTGTTCTGTTCCTCATTTCCTTATGGTTCACTTCCAGGCGTAACAGTTCCAATAAATCTAAACCCTCTTTGAACCCCATTATCCCAAATGTGTCTAAGGAAATCCAGGAAATACGAATTGACCATTCTCGGAACACTACTCATTCTGACCCCAAAGTTCAATTGGCTTCTAACCCTGAGCCTTTGCCGGAGGCAGAGCCTTTAGCGACGCTGCTTCAGACGGAAGAAGGAAGCCCACCTAGTGGACGCCATAGAATTCACATTGAAATTGGGAAGGACCATCGAATTTCTTACCCAGAGAGAGGTGGCGGTTCGTCCCACGGAAGTGGAGAGGCTCGTTCTGGTGATCAGGCGCCAATGACTGTGCCGGAGGTTTCGCATTTGGGTTGGGGCCATTGGTATACTCTCAGAGAGCTTGAATATTCTACTAATAGTTTTGCGGATGAAAATGTAATTGGTGAAGGCGGATATGGTATTGTGTACCGTGGGGTTCTTGAGGACAACACCGTGGTTGCCATCAAGAATTTGCTCAATAACAGAGGACAAGCTGAGAAGGAGTTTAAGGTTGAAGTGGAAGCAATTGGACGTGTTCGCCACAAGAATCTGGTGCGTTTGCTTGGCTATTGTGCTGAAGGAGCTCACAGGATACTTGTCTACGAGTACATTGATAATGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGACCTTGTAGCCCTCTAACATGGGACATTCGAATGAATATAATTGTTGGAACAGCGAAAGGGTTAACATACCTCCACGAGGGACTCGAGCCTAAGGTTGTTCACCGCGATATCAAGTCAAGTAACATTTTGCTTGACAAGCAGTGGAATCCAAAGGTCTCTGACTTCGGCCTAGCGAAGCTTTTAGGATCAGAAAGGAGTTATGTAACAACTCGTGTGATGGGAACTTTCGGATACGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTTGGAATCCTCATTATGGAGATAATTTCAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGCTTCTGCTTTCACCATTAACTTTTCATGGTTGATTGGTGGATCAAACTTTCAGGTCAACCTAGTTGAGTGGCTTAAAATAATGGTTAGTAATCGAAACGCTGAGGGCGTTCTGGATCCTAAGTTGCCTGAAAAGCCTTCAACAAGGGCACTGAAGCGTGCTCTGTTAGTAGCTTTACGGTGTGTGGATCCTAATGTTCAGAAGAGGCCAAAAATGGGGCATGTAATTCATATGCTTGAAGCAGACGAGTTTCCTTTCCGAGATGATCGTAGAGTGGGACGAGAACCAGGACGATCACTACTGAAGGAAAAGCTCATGGAAAGGCTTGTGAGTGAATCTGGAGAAAGCAGCGGATATGAAAGTGGAGCAACACAAGCAAGCCGACATCTATGGAGAAAGCAAGAACTTGAAGAACAACAGCCTCGCGAACCTCACACTTTAAGGTGA 1620 45.19 MSNYAFLNDQLSKRTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTSRRNSSNKSKPSLNPIIPNVSKEIQEIRIDHSRNTTHSDPKVQLASNPEPLPEAEPLATLLQTEEGSPPSGRHRIHIEIGKDHRISYPERGGGSSHGSGEARSGDQAPMTVPEVSHLGWGHWYTLRELEYSTNSFADENVIGEGGYGIVYRGVLEDNTVVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILVYEYIDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIISGRNPVDYSRPSGEASAFTINFSWLIGGSNFQVNLVEWLKIMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREPGRSLLKEKLMERLVSESGESSGYESGATQASRHLWRKQELEEQQPREPHTLR* 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 17717842 17720222 - Chy3G065350.1 Chy03g01555 223716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01555 539 PANTHER OS01G0323000 PROTEIN 5 515 - -
Chy03g01555 539 Gene3D Phosphorylase Kinase; domain 1 154 256 - -
Chy03g01555 539 ProSiteProfiles Protein kinase domain profile. 181 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01555 539 Pfam Protein kinase domain 182 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01555 539 Gene3D Transferase(Phosphotransferase) domain 1 257 480 - -
Chy03g01555 539 SMART serkin_6 181 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01555 539 MobiDBLite consensus disorder prediction 521 539 - -
Chy03g01555 539 PANTHER RECEPTOR-LIKE KINASE PLANT 5 515 - -
Chy03g01555 539 MobiDBLite consensus disorder prediction 500 539 - -
Chy03g01555 539 MobiDBLite consensus disorder prediction 131 154 - -
Chy03g01555 539 CDD STKc_IRAK 187 471 - -
Chy03g01555 539 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Chy03g01555 539 SUPERFAMILY Protein kinase-like (PK-like) 165 471 IPR011009 -
Chy03g01555 539 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Chy03g01555 539 MobiDBLite consensus disorder prediction 505 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00791 Chy-Chr1:6342088 Chy03g01555 Chy-Chr3:17717842 6.37E-172 dispersed
Chy03g01555 Chy-Chr3:17717842 Chy06g00152 Chy-Chr6:1007186 0 dispersed
Chy06g00975 Chy-Chr6:7208470 Chy03g01555 Chy-Chr3:17717842 3.38E-81 dispersed
Chy02g00904 Chy-Chr2:5874875 Chy03g01555 Chy-Chr3:17717842 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71150 PF00069 Pkinase 2.20E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01555 - - csv:101203008 999.964