Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy03g01615 | ATGAAAATGGAGGTTTCTTCTTCTGATCATCCATATAATCAACACCATTCTCATCACTCTGCTTCAAATCCTTTCTACTTATCTCCTCATTTCAACAACAATAACACTGAAATCTTTTATGGGATTCCTGATAATTCCTCTCTTCATCATCACTCTGCTGCTGCTTCCCTCTCTGTAATGCCTCTCAAATCCGATGGTTCACTCTGTATTATGGAAGCCCTTTCAAGATCTCAAACTGAAGGGATGGTGCCGAGTTCTTCACCGAAACTTGAGGATTTTCTTGGTGGTGCAACAATGGGAGGTCGAGGAGGCTATTTTAATCAAAATGCTGAATCTGAATCCGACAGGGAACATTCTTTCGACCTTCTTCAAAGACCCATTAGACAAAATCAACAAATTTTAATTCAAAATTCCAATCAATATTATTCTGGGTTACTTCCTTCTTCCATTGGAATTGGAACTTGTGATCCCCAAATTCTTCCTCCTGATGACGACGGAATCCCTTGCTTTAGAAACTGGGTTTCTCGTTCTCACTACTCCGCCACTCATAATACTCTCGAGCACCACATTACCGGCGGCGATGGCGGCGGCGGCACTCTTATGAATGAAAGTAATGGCGGCGGCTCTGCTTCCATTGGCGGAATGAGCTGTGGAGAATTACAGTCGTTGAGTTTGTCGATGAGTCCAGGTTCTCAATCGAGCTCGTTCACGACTTCCGGCCAGATTTCCCCTACTGGAGGCGACGGCACCGCCGTGGAAACCAAAAAAAGAGGCCCCGGAAAACTCTGCCAGAAACAACCCGTTCATCGTAAATCCATTGATACTTTTGGCCAAAGAACCTCTCAATATCGTGGCGTCACCAGACATAGATGGACGGGGAGATATGAAGCTCATCTGTGGGATAACAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGTGTATCTTGGAGGATATGATATGGAAGAAAAAGCTGCGAGAGCTTACGATCTTGCCGCCCTCAAGTATTGGGGACCCTCTACTCATATAAATTTTCCGTTGGAAAATTATCAGACTGAACTAGAAGAAATGAAGAATATGAGCCGCCAAGAATATGTTGCTCACTTGAGAAGGAAAAGCAGTGGCTTTTCAAGGGGTGCTTCAGTTTTCCGTGGTGTCACAAGACATCACCAACATGGAAGATGGCAAGCAAGAATTGGGAGAGTTGCTGGAAACAAAGATCTTTATCTTGGGACATTTAGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATAGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCCAGATATGATGTCGAGAAAATCATGGCTAGTAATACTCTACTGGCCGGCGAGCTGGCTAGAAGGAACAAGGATGTCGAACCAAGCAACGATTCCTCAGTCGCTCCCTACGACTCCTCCATTGTCTCAAACAATAATGGTGGGATTGGGATTGGGATGGAAATAAATCCCGACGCCAACACCACAAATGGGAACGCTAATGATTGGAAAATGGCATTGTATCAAAATCCATCACACCACCAACAACAGGCAGCTGCCGCTACTTGTGTTGCTGACACTTTGGATAATCATCATCATCAAAACAAGTCGATGGCTGTATCGGGCAGTTATCGAAATGCTTCGTTTTCGATGGCATTGCAGGATTTGATTGGGATCGAATCGTTAAGCGCTAATACTCATGGGATTGAAGATGATGTGAGCAAACATGTGACGCATTTTTCAAATTCATCATCATTGGTGACGAGTTTAAGTAGCTCGAGAGAAGGTAGTCCCGACAAAACGAATGTGTCAATGCCGTTTGGAAAGGCCCCACCCTTAATGGCATCGAAGCTAATCGGTGCAACAAACGGTGTTGGAGTCGGGTCTTGGTATCCATCCCCACAGCAGCTGAGGCCAACAGCAGCAGCAGCCATTTCCATGGCACATTTGCCTGTTTTTGCAACATGGAATGACACTTAA | 2007 | 44.94 | MKMEVSSSDHPYNQHHSHHSASNPFYLSPHFNNNNTEIFYGIPDNSSLHHHSAAASLSVMPLKSDGSLCIMEALSRSQTEGMVPSSSPKLEDFLGGATMGGRGGYFNQNAESESDREHSFDLLQRPIRQNQQILIQNSNQYYSGLLPSSIGIGTCDPQILPPDDDGIPCFRNWVSRSHYSATHNTLEHHITGGDGGGGTLMNESNGGGSASIGGMSCGELQSLSLSMSPGSQSSSFTTSGQISPTGGDGTAVETKKRGPGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASVFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVEKIMASNTLLAGELARRNKDVEPSNDSSVAPYDSSIVSNNNGGIGIGMEINPDANTTNGNANDWKMALYQNPSHHQQQAAAATCVADTLDNHHHQNKSMAVSGSYRNASFSMALQDLIGIESLSANTHGIEDDVSKHVTHFSNSSSLVTSLSSSREGSPDKTNVSMPFGKAPPLMASKLIGATNGVGVGSWYPSPQQLRPTAAAAISMAHLPVFATWNDT* | 669 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 18090114 | 18093092 | + | Chy3G065950.1 | Chy03g01615 | 223776 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy03g01615 | 668 | Pfam | AP2 domain | 282 | 340 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | Pfam | AP2 domain | 383 | 434 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | ProSiteProfiles | AP2/ERF domain profile. | 384 | 442 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | SUPERFAMILY | DNA-binding domain | 383 | 444 | IPR016177 | GO:0003677 | |
Chy03g01615 | 668 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Chy03g01615 | 668 | MobiDBLite | consensus disorder prediction | 223 | 269 | - | - | |
Chy03g01615 | 668 | Gene3D | AP2/ERF domain | 384 | 444 | IPR036955 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | Gene3D | AP2/ERF domain | 281 | 350 | IPR036955 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | SUPERFAMILY | DNA-binding domain | 281 | 350 | IPR016177 | GO:0003677 | |
Chy03g01615 | 668 | ProSiteProfiles | AP2/ERF domain profile. | 282 | 348 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | SMART | rav1_2 | 384 | 448 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | SMART | rav1_2 | 282 | 354 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | PRINTS | Ethylene responsive element binding protein signature | 283 | 294 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | PRINTS | Ethylene responsive element binding protein signature | 424 | 444 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Chy03g01615 | 668 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 20 | 621 | - | - | |
Chy03g01615 | 668 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT | 20 | 621 | - | - | |
Chy03g01615 | 668 | CDD | AP2 | 383 | 444 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | CDD | AP2 | 281 | 348 | IPR001471 | GO:0003700|GO:0006355 | |
Chy03g01615 | 668 | MobiDBLite | consensus disorder prediction | 223 | 248 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g01615 | Chy-Chr3:18090114 | Chy05g00712 | Chy-Chr5:9314823 | 1.43E-117 | dispersed | |
Chy04g00696 | Chy-Chr4:8352238 | Chy03g01615 | Chy-Chr3:18090114 | 2.74E-130 | transposed | |
Chy02g00817 | Chy-Chr2:5154355 | Chy03g01615 | Chy-Chr3:18090114 | 0 | wgd | |
Chy03g01615 | Chy-Chr3:18090114 | Chy07g00211 | Chy-Chr7:1699930 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17763 | PF00847 | AP2 | 1.50E-13 | CL0081 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy03g01615 | K09285 | - | csv:101212797 | 1242.64 |