Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01615 ATGAAAATGGAGGTTTCTTCTTCTGATCATCCATATAATCAACACCATTCTCATCACTCTGCTTCAAATCCTTTCTACTTATCTCCTCATTTCAACAACAATAACACTGAAATCTTTTATGGGATTCCTGATAATTCCTCTCTTCATCATCACTCTGCTGCTGCTTCCCTCTCTGTAATGCCTCTCAAATCCGATGGTTCACTCTGTATTATGGAAGCCCTTTCAAGATCTCAAACTGAAGGGATGGTGCCGAGTTCTTCACCGAAACTTGAGGATTTTCTTGGTGGTGCAACAATGGGAGGTCGAGGAGGCTATTTTAATCAAAATGCTGAATCTGAATCCGACAGGGAACATTCTTTCGACCTTCTTCAAAGACCCATTAGACAAAATCAACAAATTTTAATTCAAAATTCCAATCAATATTATTCTGGGTTACTTCCTTCTTCCATTGGAATTGGAACTTGTGATCCCCAAATTCTTCCTCCTGATGACGACGGAATCCCTTGCTTTAGAAACTGGGTTTCTCGTTCTCACTACTCCGCCACTCATAATACTCTCGAGCACCACATTACCGGCGGCGATGGCGGCGGCGGCACTCTTATGAATGAAAGTAATGGCGGCGGCTCTGCTTCCATTGGCGGAATGAGCTGTGGAGAATTACAGTCGTTGAGTTTGTCGATGAGTCCAGGTTCTCAATCGAGCTCGTTCACGACTTCCGGCCAGATTTCCCCTACTGGAGGCGACGGCACCGCCGTGGAAACCAAAAAAAGAGGCCCCGGAAAACTCTGCCAGAAACAACCCGTTCATCGTAAATCCATTGATACTTTTGGCCAAAGAACCTCTCAATATCGTGGCGTCACCAGACATAGATGGACGGGGAGATATGAAGCTCATCTGTGGGATAACAGTTGCAAGAAAGAAGGACAAACCAGAAAAGGAAGACAAGTGTATCTTGGAGGATATGATATGGAAGAAAAAGCTGCGAGAGCTTACGATCTTGCCGCCCTCAAGTATTGGGGACCCTCTACTCATATAAATTTTCCGTTGGAAAATTATCAGACTGAACTAGAAGAAATGAAGAATATGAGCCGCCAAGAATATGTTGCTCACTTGAGAAGGAAAAGCAGTGGCTTTTCAAGGGGTGCTTCAGTTTTCCGTGGTGTCACAAGACATCACCAACATGGAAGATGGCAAGCAAGAATTGGGAGAGTTGCTGGAAACAAAGATCTTTATCTTGGGACATTTAGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATAGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCCAGATATGATGTCGAGAAAATCATGGCTAGTAATACTCTACTGGCCGGCGAGCTGGCTAGAAGGAACAAGGATGTCGAACCAAGCAACGATTCCTCAGTCGCTCCCTACGACTCCTCCATTGTCTCAAACAATAATGGTGGGATTGGGATTGGGATGGAAATAAATCCCGACGCCAACACCACAAATGGGAACGCTAATGATTGGAAAATGGCATTGTATCAAAATCCATCACACCACCAACAACAGGCAGCTGCCGCTACTTGTGTTGCTGACACTTTGGATAATCATCATCATCAAAACAAGTCGATGGCTGTATCGGGCAGTTATCGAAATGCTTCGTTTTCGATGGCATTGCAGGATTTGATTGGGATCGAATCGTTAAGCGCTAATACTCATGGGATTGAAGATGATGTGAGCAAACATGTGACGCATTTTTCAAATTCATCATCATTGGTGACGAGTTTAAGTAGCTCGAGAGAAGGTAGTCCCGACAAAACGAATGTGTCAATGCCGTTTGGAAAGGCCCCACCCTTAATGGCATCGAAGCTAATCGGTGCAACAAACGGTGTTGGAGTCGGGTCTTGGTATCCATCCCCACAGCAGCTGAGGCCAACAGCAGCAGCAGCCATTTCCATGGCACATTTGCCTGTTTTTGCAACATGGAATGACACTTAA 2007 44.94 MKMEVSSSDHPYNQHHSHHSASNPFYLSPHFNNNNTEIFYGIPDNSSLHHHSAAASLSVMPLKSDGSLCIMEALSRSQTEGMVPSSSPKLEDFLGGATMGGRGGYFNQNAESESDREHSFDLLQRPIRQNQQILIQNSNQYYSGLLPSSIGIGTCDPQILPPDDDGIPCFRNWVSRSHYSATHNTLEHHITGGDGGGGTLMNESNGGGSASIGGMSCGELQSLSLSMSPGSQSSSFTTSGQISPTGGDGTAVETKKRGPGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASVFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVEKIMASNTLLAGELARRNKDVEPSNDSSVAPYDSSIVSNNNGGIGIGMEINPDANTTNGNANDWKMALYQNPSHHQQQAAAATCVADTLDNHHHQNKSMAVSGSYRNASFSMALQDLIGIESLSANTHGIEDDVSKHVTHFSNSSSLVTSLSSSREGSPDKTNVSMPFGKAPPLMASKLIGATNGVGVGSWYPSPQQLRPTAAAAISMAHLPVFATWNDT* 669
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 18090114 18093092 + Chy3G065950.1 Chy03g01615 223776
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01615 668 Pfam AP2 domain 282 340 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 Pfam AP2 domain 383 434 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 ProSiteProfiles AP2/ERF domain profile. 384 442 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 SUPERFAMILY DNA-binding domain 383 444 IPR016177 GO:0003677
Chy03g01615 668 MobiDBLite consensus disorder prediction 1 16 - -
Chy03g01615 668 MobiDBLite consensus disorder prediction 223 269 - -
Chy03g01615 668 Gene3D AP2/ERF domain 384 444 IPR036955 GO:0003700|GO:0006355
Chy03g01615 668 Gene3D AP2/ERF domain 281 350 IPR036955 GO:0003700|GO:0006355
Chy03g01615 668 SUPERFAMILY DNA-binding domain 281 350 IPR016177 GO:0003677
Chy03g01615 668 ProSiteProfiles AP2/ERF domain profile. 282 348 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 SMART rav1_2 384 448 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 SMART rav1_2 282 354 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 PRINTS Ethylene responsive element binding protein signature 283 294 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 PRINTS Ethylene responsive element binding protein signature 424 444 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 MobiDBLite consensus disorder prediction 1 21 - -
Chy03g01615 668 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 20 621 - -
Chy03g01615 668 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ANT 20 621 - -
Chy03g01615 668 CDD AP2 383 444 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 CDD AP2 281 348 IPR001471 GO:0003700|GO:0006355
Chy03g01615 668 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01615 Chy-Chr3:18090114 Chy05g00712 Chy-Chr5:9314823 1.43E-117 dispersed
Chy04g00696 Chy-Chr4:8352238 Chy03g01615 Chy-Chr3:18090114 2.74E-130 transposed
Chy02g00817 Chy-Chr2:5154355 Chy03g01615 Chy-Chr3:18090114 0 wgd
Chy03g01615 Chy-Chr3:18090114 Chy07g00211 Chy-Chr7:1699930 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17763 PF00847 AP2 1.50E-13 CL0081 Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01615 K09285 - csv:101212797 1242.64