Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01617 ATGGCTTCTTGGTGGGGAAGAGAAAGTCACAAGGGAACCCCTGTCGTTGTGAAGATGGAAAATCCCAACTGGTCAATAGTTGAAGTTGAAAGTCCTTCCGACGATGACTTCATAATCGGCGCCGAGTCGCCACCGGGTCGAGCCCGAGACAAGGGACGAGGCAAAAATGCCAAACAGCTCACTTGGGTTCTTCTTCTTAAAGCTCACAAAGCCGCCGGTTGTTTAACCTCCATTGGCTCTGCATTGGTCAACATCGTCACCGTCGTTAAACGCCGTCTTGCTTCTGGAAGAACTGACGCCGACACGGACGCCGACAATGACAACGCTGACGGCGGCGTGAGGGAGAACCCAACTGTTAAAACCAGGTTCTATTTGTTTATTAAGGTTTTCCTTTGGCTGTCGGTGCTTCTGTTAGGGTTTGAGTTGGCGGCTTATTATAAAGGTTGGCATTTTGAGGCACCACATCTTCAATTGGACTACTTGTGGACAACCCCATTTGGGGTTAAGGATGCTTTTGACTGGTTTTATTCCAAATGGGTTTTAATTCGGGTTGCATATTTTGCTCCTCCTCTACAGTTTTTAGCCAATGTTTGTATAGTGTTGTTCCTCATTCAAACTTTGGATAGGCTTATTCTTTGTCTGGGTTGTTTCTGGATTCGATTCAAGAAAATCAAACCCGTTCCTAAAGTTGCTGCTATGGATCTTGAGTCTGGTGAAACTGGCTACTTCCCTATGGTTCTTGTTCAGATTCCAATGTGCAATGAGAAAGAGGTTTATCAGCAATCAATTGCTGCTGTCTGCAACTTGGACTGGCCAAAAGACAAGTTACTGATTCAGGTTCTTGATGACTCGGATGATCCAATCACCCAATTGCTGATCAAAGAGGAGGTACATAAATGGCAACAACTCGATGCCAAAATTGAATATCGACATCGGGTGATCCGAGAGGGATATAAGGCTGGCAATCTCAAGTCTGCCATGAATTGTAGCTCTGTCAAAGACTATGAGTTTGTTGCTATCTTTGATGCTGATTTTCAGCCTGCTTCTGATTTCCTCAAAAGAACAGTTCCTCATTTTAAGGATAATGAGGAACTAGGACTCGTTCAAGCACGATGGTCATTCGTGAACAAAGACGAGAACTTGCTAACCAGACTACAGAATATTAACTTAGCCTTCCATTTTGAAGTAGAGCAACAAGTGAATGGTGTGTTTCTCAATTTCTTTGGATTCAACGGAACTGCTGGTGTTTGGAGGATAAAGGCTCTTGAAGAAGCCGGTGGCTGGTTGGAAAGGACCACTGTCGAGGACATGGACATTGCCGTCCGTGCTCATCTTCATGGTTGGAAATTCATATTCCTCAATGACGTAGAGTGCCAATGTGAATTACCAGAATCGTATGAAGCATATAGAAAACAACAGCATAGATGGCATTCGGGACCAATGCAACTGTTTCGACTTTGTTTGCCCGATGTAGTTCGGTCGAAGATTGGCATATCAAAGAAATTCAATTTGATCTTCCTGTTTTTTCTCTTACGGAAGCTGATACTGCCATTTTATTCATTTACCCTCTTCTGCATAATTCTCCCAATGACGATGTTTGTTCCTGAAGCTGAGTTGCCGGCGTGGGTTGTATGTTACATTCCAGCTACAATGTCCTTTCTCAACATCCTTCCAGCACCAAAGTTCTTCCCCTTCATTGTTCCTTACCTCCTCTTTGAGAATACTATGTCAGTAACTAAGTTTAACGCAATGGTCTCGGGACTCTTCCAGCTAGGTAGTGCATATGAGTGGGTTGTTACGAAGAAATCAGGCCGCTCGTCTGAGGGTGATCTTTCCTCAATGGTTGAGAAGAAAAGGATGAACTCTGAAAAGAGTGTCTCAGCAAACAACCTTGAGGAGATCGAATTAATCCAAAAACAGGACAAGAAGTTGCCAAGGAAGAAGCATAACAGAATATACATGAAGGAGCTAGCACTAGCTTTCCTTCTTTTAACAGCCTCAGCTAGAAGCCTCCTCTCAGCTCAAGGGATTCATTTTTACTTCCTGCTGTTTCAGGGAATATCCTTCCTTCTTGTTGGTCTAGACTTGATCGGCGAGCAGGTTGTTTAA 2109 43.91 MASWWGRESHKGTPVVVKMENPNWSIVEVESPSDDDFIIGAESPPGRARDKGRGKNAKQLTWVLLLKAHKAAGCLTSIGSALVNIVTVVKRRLASGRTDADTDADNDNADGGVRENPTVKTRFYLFIKVFLWLSVLLLGFELAAYYKGWHFEAPHLQLDYLWTTPFGVKDAFDWFYSKWVLIRVAYFAPPLQFLANVCIVLFLIQTLDRLILCLGCFWIRFKKIKPVPKVAAMDLESGETGYFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKDKLLIQVLDDSDDPITQLLIKEEVHKWQQLDAKIEYRHRVIREGYKAGNLKSAMNCSSVKDYEFVAIFDADFQPASDFLKRTVPHFKDNEELGLVQARWSFVNKDENLLTRLQNINLAFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEEAGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDVVRSKIGISKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKFFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLSSMVEKKRMNSEKSVSANNLEEIELIQKQDKKLPRKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVV* 703
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18105672 18108212 - Chy3G065970.1 Chy03g01617 223778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01617 702 PANTHER - 8 701 - -
Chy03g01617 702 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 12-RELATED 8 701 - -
Chy03g01617 702 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 535 IPR029044 -
Chy03g01617 702 Pfam Glycosyl transferase family group 2 338 544 IPR001173 -
Chy03g01617 702 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01617 Chy-Chr3:18105672 Chy04g00287 Chy-Chr4:2598661 0 dispersed
Chy03g01617 Chy-Chr3:18105672 Chy07g00213 Chy-Chr7:1721438 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01617 - - csv:101203245 1354.73