Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01644 ATGTTGAACCTCTTCTCTTTGTCTCACCGCATTTCCATTTCCATCTTCATCTTCCTCTTCCTCTTCCTCGTCTCTCCGCCGTTGCTTCCTTCCTCCGCTCTTCCTCTCTCCGACTCCGATCAACCGCTTCTCGCTAATACTACGCTCCAGTCCAATAATGTTTCCGTTCCGAGGAATAAGGAAGGTAGTTTTGCTGACATCATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAGTGAAGCAATTGATGCAGGAAGCTTCAACAACAGTGTAGCAGAGCAGCAGGCAACTCTGGAGACTGTGGCAAGGGTGAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTATATGCTTCTTACTCTAGTATTACATTTCACTTTCAGGCCATGCTATACTGGAATAAGCGTGCACTTCCTTAAACACTTGTGTTTCTACTTTAGGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGACAATAGGGCTGAAGATACCCCTACATTGATTGATCGAAAGGACAATGTCTTTATCATATCTAACTTTAAGTCTAAATATCCAGTGCTACAATTAGACTTGAGATTGATATCTGATTTGGTTATCGTAATTGTCTCTGCAACTTGTGGCGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTTCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGTTTGGAGTTCTCAACAACTAAGCTACGAGTTGTTCGTGCAGTTGCTGTTCTTGGCGGGCTTCTCCAAATTTTCCTATTTATGTGCCTCAGTGGAATCACAGCCTCGTCATGTGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTCCTATCTATGTCCTCAACAGCAGTGGTGCTGAAGTTTTTGATGGAAAAGAACTCTACTAATGCTCTTCATGGACAAGTCACAATTGGCACCCTTATTCTGCAGGATTGTGCGGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTAGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCTATGAGTAAAGTGTTGGTGATCTTGGTTGGTTTTTTGGTTGCTTTGTCAATTTTATCCCGTACGTGTATTCCTTGGCTCTTAAAACTGATGATAAGTCTATCATCACAGACCAACGAACTTTATCAATTAGCCTCAGTGGCGTTCTGCTTGCTTGTAGCCTGGTGTAGTGATAAGTTGGGCCTAAGTCTAGAATTGGGTTCCTTTGCCGCTGGAGTGATGATATCCACAACTGATCTTGCTCAACACACACTTGAACAAATAGAGCCTATAAGGAACTTTTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCACGTTGATATATTATTAGCAGCTGTTATACTGGTTATAATTGTAAAAACAATCGTAATTAGCACAGTGGTGAAGGGATTTGGGTATAACAACAGGACAGCACTTTTGGTTGGAATGTCTTTGGCTCAGATAGGAGAATTTGCTTTTGTTCTTCTAAGCCGTGCTTCTAATCTTCATCTAGTTGAGGGGAAACTGTATCTATTGCTTATTGGGACCACAGCCCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGCTAATACCTGCTGTAGTACATTTAGGCGTGCTATTGCGGTGGTTTTCTCCAGATAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATTCGCTCGGACAGTGTAAAGCAACGGTGTAAAATATTGATTTTTACCAAGTTCCCATTTAATCTCTCATCTGATTTCAGCCTCCCGTTGCTACTTCAAGACTCTTCATCAGATAGCTATCAGCAAAAGGAAAAAAATAAAGTTCCAAGGCTGCCATTTACCCCTTTCTTGCTGACAGCAACAATTTACTTACCATCG 1998 41.84 MLNLFSLSHRISISIFIFLFLFLVSPPLLPSSALPLSDSDQPLLANTTLQSNNVSVPRNKEGSFADIIDRALENEFKENDQSEAIDAGSFNNSVAEQQATLETVARVKSKKNDTKEEKYMLLTLVLHFTFRPCYTGISVHFLKHLCFYFRFQLQNVFNLDSDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVLVILVGFLVALSILSRTCIPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTALLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRCKILIFTKFPFNLSSDFSLPLLLQDSSSDSYQQKEKNKVPRLPFTPFLLTATIYLPS 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18293432 18302721 - Chy3G066240.1 Chy03g01644 223805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01644 666 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 150 613 IPR045158 GO:0015386|GO:0071805|GO:1902600
Chy03g01644 666 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 15 125 IPR045158 GO:0015386|GO:0071805|GO:1902600
Chy03g01644 666 PANTHER K(+) EFFLUX ANTIPORTER 6 150 613 - -
Chy03g01644 666 PANTHER K(+) EFFLUX ANTIPORTER 6 15 125 - -
Chy03g01644 666 Pfam Sodium/hydrogen exchanger family 202 571 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Chy03g01644 666 Gene3D - 195 578 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01644 Chy-Chr3:18293432 Chy06g00189 Chy-Chr6:1238433 5.73E-33 dispersed
Chy02g01210 Chy-Chr2:8709485 Chy03g01644 Chy-Chr3:18293432 0 transposed
Chy06g00880 Chy-Chr6:6348128 Chy03g01644 Chy-Chr3:18293432 0 transposed
Chy01g00181 Chy-Chr1:1221375 Chy03g01644 Chy-Chr3:18293432 1.19E-31 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01644 - - csv:101217282 989.178