Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01648 ATGGCCAATTCTGCTTGTGGGGTTTCGGAGTTAGAACTCTGTAGAAACGATTCGGCTGCGCTTCATTTTAAATTAATCGCCATCGCGTCAATTTTAACAGCCGGAGTCATCGGGATCGCTCTTCCGTTGTTTGGTAAACAGCGTCGGTTTCTCAAAACAGACGGCAACCTATTCGTGGCGGCAAAGGCGTTTGCCGCTGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAAGCTCTCTCGGATCCGTGCTTGCCGGAATTTCCATGGTCGAAATTCCCCTTCTCTGGGTTCTTCGCGATGATGGCGTCGCTCTTGACGCTGCTCGTGGACTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGAATAATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCATTGATGGATACCGGGTTGGAATCCGGCATTGTTCCGGCTGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGAGGGGGGCGGGATGCACATCGTGGGAATGCACGCCCACGCCGCCCACCACCGGCACAATCATCCACAAGGGAAGGATGCATATCTAATAAAAATTTTGGAGCTTGGAATAGTGTCACATTCAGTGATAATTGGGCTGTCTCTTGGAGTATCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCCCTTTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCCCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTTGCCATCACCACACCCCTCGGTATCGCTGTAGGCGCTGCCATTGCCTCCACCTATAACCCCAACAGCACCGGGGCGTTGGTTGCTGAAGGCATTTTGGACTCTCTATCTGCTGGAATTCTGGTGTACATGGCTCTTGTTGATTTGATTGCGGCTGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTAGACTCCAACTTGTTTCGTATTGTACTCTCTTCCTCGGTGCCGGGTTGATGTCTTCGCTCGCACTCTGGGCTTGA 1044 51.63 MANSACGVSELELCRNDSAALHFKLIAIASILTAGVIGIALPLFGKQRRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGIIRSKEEANRVGSLMDTGLESGIVPAGDLNVKVFGEEEGGGMHIVGMHAHAAHHRHNHPQGKDAYLIKILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGIAVGAAIASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQLVSYCTLFLGAGLMSSLALWA* 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18325582 18328334 - Chy3G066280.1 Chy03g01648 223809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01648 347 PANTHER ZINC/IRON TRANSPORTER 196 347 - -
Chy03g01648 347 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 196 347 - -
Chy03g01648 347 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 1 190 - -
Chy03g01648 347 TIGRFAM zip: ZIP zinc/iron transport family 6 347 IPR004698 GO:0005385|GO:0016021|GO:0071577
Chy03g01648 347 PANTHER ZINC/IRON TRANSPORTER 1 190 - -
Chy03g01648 347 Pfam ZIP Zinc transporter 22 344 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01648 Chy-Chr3:18325582 Chy07g00503 Chy-Chr7:4003300 1.27E-92 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01648 K14709 - csv:101218224 646.351