Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy03g01723 ATGGAACCACATTTTCTGTTTTCCATACCCCTTTTTCTTCTTTTCGCACTCCTCCATCTTGCTTTTGCTACGCTGTCTCCTTCTGGTGTTAACTTTGAAGTCGTAGCGTTGATGGCCATAAAATATGATTTATTAGATCCCCACAATGTTCTGGAGAACTGGGATTCTAATTCTGTGGATCCTTGCAGCTGGAGAATGGTCACCTGTTCTCCAGATGGATATGTTTCTGTTTTGGGGCTACCTAGCCAGAGTTTGTCCGGGGTCTTATCACCTGGGATTGGAAACCTCACCAAGTTGGAATCTGTGTTGCTTCAGAACAATGACATTTCAGGACCAATTCCTGCAACCATCGGAAAGTTAGAGAACCTCCAGACTCTTGATCTCTCCAACAATGTATTTAGTGGCCAAATACCCAGTTCCCTCGGAGACCTGAAGAAGCTGAACTATTTGCGACTGAATAACAACAGCCTAACTGGACCTTGTCCTGAATCTCTATCCAAAGTTGAAGGTCTCACGCTCGTGGACCTTTCATACAATAACTTGAGTGGCTCCTTACCCAAAATATCAGCAAGAACATTCAAGATTGTTGGTAACCCTCTGATCTGTGGTCCAAACAACTGTTCTGCTATCTTTCCAGAGCCATTGTCGTTTGCCCCAGATGCTCTTGAAGAAAATTTGGGGTTTGGTAAGAGCCACCGCAAAGCAATTGCTTTTGGGGCAAGTTTTAGTGCTGCATTTATTGTTCTAGTCCTTATTGGACTACTTGTCTGGTGGAGATACAGACACAACCAGCAGATTTTCTTTGATGTAAATGATCAATATGACCCAGAGGTACGCTTGGGTCATTTGAGAAGGTACACATTCAAGGAACTTCGGGCAGCAACTGATCACTTCAACCCTAAGAATATCTTGGGAAGAGGTGGGTTTGGAATTGTGTACAAGGGATGCTTAAATGATGGGACTCTGGTAGCGGTTAAAAGGCTGAAGGATTATAACACAGCTGGTGGGGAGATCCAATTTCAGACTGAAGTAGAGATGATAAGCTTAGCTGTACACCGAAATCTCCTCAAGCTTTTTGGCTTTTGTTCTACTGAGAGCGAAAGACTTCTGGTTTACCCTTTCATGCCCAACGGCAGCGTTGGATCTCGTCTAAGAGATCATATCCATGGGCAGCCGGCTCTAGATTGGGCGATGAGAAAGAGAATAGCCTTGGGCACAGCTAGGGGATTGGTATACTTGCACGAGCAGTGTGACCCCAAAATTATTCATCGTGATGTCAAGGCCGCCAACATTCTCCTTGATGAAGACTTCGAGGCCGTCGTGGGAGACTTTGGGTTGGCCAAACTTTTGGATCACAGGGATTCTCATGTTACTACAGCGGTGCGTGGCACTGTTGGCCATATTGCCCCAGAATACTTATCAACGGGCCAATCCTCAGAAAAGACTGATGTTTTTGGGTTTGGAATCTTGCTTTTGGAGTTGATTACTGGTCAGAAGGCTCTGGATTTTGGTCGAGGAGCAAACCAGAAAGGCGTGATGCTCGATTGGGTGAAAAGGTTGCATCAGGAAGGGAAGCTGAATATGATGGTGGATAAAGATGTAAAGGGTAACTTCGACAGAGTTGAGTTAGAGGAAATGGTCCAGGTTGCCCTGTTGTGCACTCAATTCAATCCTTCTCACCGACCCAAAATGTCTGAAGTATTAAAAATGTTGGAAGGCGATGGTTTAGCTGAGAAATGGGAAGCATCACAGCACATCGAAACGCCAAGATGCCGACCGTGTGAGAATCCACCTCAACGTTACTCAGATTATATAGAAGAATCTTCTCTGATTGTAGAAGCGATGGAGCTTTCAGGCCCCAGATGA 1866 45.12 MEPHFLFSIPLFLLFALLHLAFATLSPSGVNFEVVALMAIKYDLLDPHNVLENWDSNSVDPCSWRMVTCSPDGYVSVLGLPSQSLSGVLSPGIGNLTKLESVLLQNNDISGPIPATIGKLENLQTLDLSNNVFSGQIPSSLGDLKKLNYLRLNNNSLTGPCPESLSKVEGLTLVDLSYNNLSGSLPKISARTFKIVGNPLICGPNNCSAIFPEPLSFAPDALEENLGFGKSHRKAIAFGASFSAAFIVLVLIGLLVWWRYRHNQQIFFDVNDQYDPEVRLGHLRRYTFKELRAATDHFNPKNILGRGGFGIVYKGCLNDGTLVAVKRLKDYNTAGGEIQFQTEVEMISLAVHRNLLKLFGFCSTESERLLVYPFMPNGSVGSRLRDHIHGQPALDWAMRKRIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDFGRGANQKGVMLDWVKRLHQEGKLNMMVDKDVKGNFDRVELEEMVQVALLCTQFNPSHRPKMSEVLKMLEGDGLAEKWEASQHIETPRCRPCENPPQRYSDYIEESSLIVEAMELSGPR* 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 18729498 18733480 - Chy3G067030.1 Chy03g01723 223884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy03g01723 621 PANTHER PROTEIN NSP-INTERACTING KINASE 3 11 621 - -
Chy03g01723 621 ProSiteProfiles Protein kinase domain profile. 298 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01723 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 621 - -
Chy03g01723 621 Gene3D Ribonuclease Inhibitor 30 209 IPR032675 -
Chy03g01723 621 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Chy03g01723 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Chy03g01723 621 SMART serkin_6 298 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy03g01723 621 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Chy03g01723 621 SUPERFAMILY L domain-like 32 192 - -
Chy03g01723 621 Gene3D Transferase(Phosphotransferase) domain 1 375 590 - -
Chy03g01723 621 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Chy03g01723 621 Gene3D Phosphorylase Kinase; domain 1 267 374 - -
Chy03g01723 621 SUPERFAMILY Protein kinase-like (PK-like) 274 572 IPR011009 -
Chy03g01723 621 Pfam Protein kinase domain 300 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00222 Chy-Chr2:1483656 Chy03g01723 Chy-Chr3:18729498 0 dispersed
Chy02g02519 Chy-Chr2:28567627 Chy03g01723 Chy-Chr3:18729498 1.71E-103 dispersed
Chy03g01723 Chy-Chr3:18729498 Chy10g01091 Chy-Chr10:15982725 0 dispersed
Chy03g01723 Chy-Chr3:18729498 Chy09g00168 Chy-Chr9:1428418 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71159 PF00069 Pkinase 3.60E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy03g01723 - - csv:101208885 1193.72