Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy04g00019 | ATGGCGTTGGCGGTGAAGGCTTTTCCGTTAACAGTGGTGAGTCACGTGGTGGGAATCGTGGCGTTGGTAATGGTATTGGTTTGGACCATTCATTTCAGAGGGGGTCTTGCTTGGGAAGCTGTTAATAAGAACCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATGAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTATTACACGGAGCCGCATTGGGACTTGGCATTGTAGGGATAATCGCAGCATTCAAAAACCATAATGAAAGTGGGATTGCTAATCTATACAGCTTGCATTCTTGGATTGGAATTGGGGTTATTAGCCTTTATGGTCTTCAGTGGGTGTATGGGTTTGCTACATTCTTCTACCCGGGAGGGTCTGGGGATCTCCGAAGAGTATCACTCCCTTGGCACGTCGTATTTGGGCTCGCTGTTTACGTATTGGCCGTTGGCAACTCGGCCTTAGGTTTCCTTGAGAAGCTCACGTTTCTGGAGAGCGGCGGCATCCCCAAGTACGGGACGGAGGCTTTTCTTGTCAATTTCACTGCCATCACCACTATCATTTTTGCTGTGTTTGTGATATTGTCTGTTATTTCTCAGCCTTGCGCTCAACAAGAAGACGACCATGGCGCTTATTCTGCTATATGA | 702 | 45.73 | MALAVKAFPLTVVSHVVGIVALVMVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIMSYKSLPLRKEVKKVIHLVLHGAALGLGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFATFFYPGGSGDLRRVSLPWHVVFGLAVYVLAVGNSALGFLEKLTFLESGGIPKYGTEAFLVNFTAITTIIFAVFVILSVISQPCAQQEDDHGAYSAI* | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 196033 | 199283 | - | Chy4G067370.1 | Chy04g00019 | 223918 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy04g00019 | 233 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Chy04g00019 | 233 | PANTHER | CYTOCHROME B561-RELATED | 1 | 233 | IPR043205 | GO:0016491 | |
| Chy04g00019 | 233 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Chy04g00019 | 233 | Gene3D | - | 2 | 226 | - | - | |
| Chy04g00019 | 233 | PANTHER | TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 1 | 1 | 233 | - | - | |
| Chy04g00019 | 233 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - | |
| Chy04g00019 | 233 | SMART | 561_7 | 49 | 175 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy04g00019 | Chy-Chr4:196033 | Chy10g01108 | Chy-Chr10:16116762 | 3.79E-41 | dispersed | |
| Chy04g00019 | Chy-Chr4:196033 | Chy09g00143 | Chy-Chr9:1221580 | 6.08E-67 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy04g00019 | K08360 | - | csv:101209308 | 429.098 |