Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00058 ATGGGGATTTTGAAGATATTGGTGGTGGTAATATTTGGTGTGGTTTTGCATGGAATTAAAAGTTCAGGGGAAGGACTTTTGGTTTTTGACTATTACAAAGAAACATGCCCTTTCGTTGAAGATATTGTTCGACGACAAGTTGAGATTGCTGTGCTCAAAGATCCTCGAATGGCTGCTTCTCTCCTTCGATTGCATTTTCATGATTGCTTTGTTATGGGATGTGATGCATCGGTTCTTTTAGACAGCACTGACGAGATGGTGAGCGAAAAGCAAGCGACTCCAAATTTAAACTCTCTTCGTGGCTTCAGTGTTATCGATAAGATAAAATACATATTGGAAGAAGCTTGTCCTTACACTGTGTCTTGTTCTGATATTTTGACCATTGCTGCTCGTGATGCTGTTGTGCTCAGAGGAGGACCTGAATGGGCAGTGTCATTGGGAAGGAAAGACTCCTTGAAAGCAAGCTTTGATGGTGCCAACAAATACATTCCTTCTCCCAATTCTTCTCTTGAGACCTTAATTGCCAACTTTCAACAACAAGGCCTCAACGTTCAAGACTTGGTTGCTCTATCAGGGCAAGATCAAAGGGTAGCACCCTTAGATTTTAGGACACCAGCAAGATTTGACAACCATTACTTCCTCAACATTCTTGAAGGCAAGGGGCTTTTAGGGTCTGATGATGTGCTCATAACCCAAGATTATGAAGGTGAAATTAGAACACAAGTTTGGAGCTATGCTTCTGATCAAACCCTTTTCTTTGATTCATTTGTTAAGTCCATTGTTAAGATGGGGAATATCAATGTTCTCACTTCTCACGAAGGCCCAAGGCATGATTCTTTTCATGGGCCGAGCAATCCAAGAAATGGCAAATCTGCTTTCCGTCGGAAGAAGCTTCAGGCGACGCCAACAATGGCGACAGCTTCCCCATCAGGTCGAAGCAACAGAGATGGAACAGCCAAAGCCATGGTTGCCGACCACATTTCTCAGTCTGTACGATCCACGTCAAATCTCCTTCATCTAATGCAGCAATCTTCTTCAGCTCAGGCATCCTCTCTCTCTCTCTCTCGTTTGTGTTTTCTGAAGCTTCACGAGTTCATTCGAACGGCTCAGTTAACAAAGTTGCCAAAGAATCTTTTGGCGAAAGCATCTACTATGAAAAATACTGGGAAAATCTTAGAGCAGATGCCGCAGGTGGTTTCATCATTAGATGCATATGTTGATAAGGGACTAGAAAGCATTCCTCGTTTGCAAACTGTGGTGCAATTACTTACAAACATGGAAAGCTCCCAGCTGAAATCTCTCTCTCAATTCCAACACCCTCAAGAGGTTCGACTTCTCCGACCTCTTTTTCCCCTCAGGAGAGCAAATCTCTTCATCAACCGAAAGATGTGGACTAGCAATTCTGTCCTTCCAAAACATGTAAAGATAAGGCCATAA 1437 42.94 MGILKILVVVIFGVVLHGIKSSGEGLLVFDYYKETCPFVEDIVRRQVEIAVLKDPRMAASLLRLHFHDCFVMGCDASVLLDSTDEMVSEKQATPNLNSLRGFSVIDKIKYILEEACPYTVSCSDILTIAARDAVVLRGGPEWAVSLGRKDSLKASFDGANKYIPSPNSSLETLIANFQQQGLNVQDLVALSGQDQRVAPLDFRTPARFDNHYFLNILEGKGLLGSDDVLITQDYEGEIRTQVWSYASDQTLFFDSFVKSIVKMGNINVLTSHEGPRHDSFHGPSNPRNGKSAFRRKKLQATPTMATASPSGRSNRDGTAKAMVADHISQSVRSTSNLLHLMQQSSSAQASSLSLSRLCFLKLHEFIRTAQLTKLPKNLLAKASTMKNTGKILEQMPQVVSSLDAYVDKGLESIPRLQTVVQLLTNMESSQLKSLSQFQHPQEVRLLRPLFPLRRANLFINRKMWTSNSVLPKHVKIRP* 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 618154 623079 + Chy4G067760.1 Chy04g00058 223957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00058 478 MobiDBLite consensus disorder prediction 296 319 - -
Chy04g00058 478 CDD secretory_peroxidase 27 274 IPR033905 GO:0004601|GO:0042744
Chy04g00058 478 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PANTHER PEROXIDASE 20 191 274 - -
Chy04g00058 478 PANTHER PEROXIDASE 20 5 192 - -
Chy04g00058 478 Gene3D - 264 274 - -
Chy04g00058 478 SUPERFAMILY Heme-dependent peroxidases 28 274 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 Pfam Peroxidase 43 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 Gene3D - 30 163 - -
Chy04g00058 478 MobiDBLite consensus disorder prediction 272 291 - -
Chy04g00058 478 Gene3D Peroxidase, domain 2 164 193 - -
Chy04g00058 478 MobiDBLite consensus disorder prediction 301 315 - -
Chy04g00058 478 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Chy04g00058 478 ProSiteProfiles Plant heme peroxidase family profile. 26 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 Gene3D Peroxidase, domain 2 194 263 - -
Chy04g00058 478 PANTHER PEROXIDASE 72-RELATED 191 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00058 478 PANTHER PEROXIDASE 72-RELATED 5 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00058 Chy-Chr4:618154 Chy02g00611 Chy-Chr2:3712025 5.61E-78 dispersed
Chy04g00058 Chy-Chr4:618154 Chy07g01260 Chy-Chr7:17305002 6.19E-84 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00058 K00430 - csv:116402797 502.671