Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g00085 | ATGGATTCACTTGATACTCCCCCTCCCCCACTTTCTGCACCCTCCAACATGGCCGTCGGAGGACAACCCGCGTATTCACCCGCCAACAACAATGCCTCCTCCACGATTGCTCTCAATCAACCTTCAGCTCAAATGATCCCCCCTTCATCCCGATTTCCCTTTAACCACCCTGTGATCCCACCTTCATCCGTATCTTTGGATTCTCTCAACGTTTCTCCTTACGACGGATCGCATTCCGCTAATTTCAACGTTGATTCCGGTAAGAAAAGGAGAGGCCGCCCCAGGAAGTACGCTCCTGATGCTAACAACATTGCCTTGGGTTTGGCTCCTACACCCACTGTTGCCTCTTCTCTTCCTCACGGAGATTTGACCGCTACTCCTGATTCGGAACAACCCGCCAGGAAAACCAGAGGAAGGCCACCGGGGTTCAGGTGGAACTGGTTTTACTCCTCATGTCTTATTGGCGAAGCCTGGAGAGGCTTAGTATATTTGCATAAAGAAATGATTTTAAGTACATTGTTCTCAAAAGTTGAGACTCATTGGTCGAAATATGGGTTCCTTGCTATATGGTTGCAGGATGTAGCAGCCAAAATTTTGTCCTTCTCACAGCAAGGACCACGAACGGTCTTCATTCTCTCTGCAAATGGTACTCTCAGTAATGCTACCCTTCGACACTCAGCATCGTCTGGTGGTTCTGTGTCATATGAGGGGCACTATGATATTATCTCTCTGTCAGGCTCGTTTTTGCTGTCAGAGAATAATGGAACTCGAAGTAGAACAGGTGGTTTGAGTGTGCTACTGGCTGGATCAAATGGACAGGTTCTTGGTGGTGGAGTTGCGGGAATGTTAATGGCAAGTTCTCAAGTACAGGTGATTGTGGGAAGTTTTCTAGAGGATGATAAAAAATCCAACACAAGTATGCTGAACTCTGGATCTTCATCTGCACCATCACAAATGATAAACTTTGGTGGTGGTGGTGGTGGTGGGCTAGCAGCAGCAGCAGCTAGCCCTCCGTCGTTAGGGGGATCGAGTGGGGAGTCGTCTGGTGAAAATGGAGATAGCCCTCTTAATAATAGGCATCCTGGAATGTTCAATAATTCTAGCCAGCCAATCCACAATCTTCAGATGTACCAATTATGGGCAGGCCAAACACAGCAGTGA | 1161 | 47.89 | MDSLDTPPPPLSAPSNMAVGGQPAYSPANNNASSTIALNQPSAQMIPPSSRFPFNHPVIPPSSVSLDSLNVSPYDGSHSANFNVDSGKKRRGRPRKYAPDANNIALGLAPTPTVASSLPHGDLTATPDSEQPARKTRGRPPGFRWNWFYSSCLIGEAWRGLVYLHKEMILSTLFSKVETHWSKYGFLAIWLQDVAAKILSFSQQGPRTVFILSANGTLSNATLRHSASSGGSVSYEGHYDIISLSGSFLLSENNGTRSRTGGLSVLLAGSNGQVLGGGVAGMLMASSQVQVIVGSFLEDDKKSNTSMLNSGSSSAPSQMINFGGGGGGGLAAAAASPPSLGGSSGESSGENGDSPLNNRHPGMFNNSSQPIHNLQMYQLWAGQTQQ* | 387 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 857773 | 861138 | - | Chy4G068030.1 | Chy04g00085 | 223984 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g00085 | 386 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 47 | 355 | IPR039605 | GO:0003680 | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 331 | 368 | - | - | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 22 | 49 | - | - | |
Chy04g00085 | 386 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 192 | 296 | IPR005175 | - | |
Chy04g00085 | 386 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 8 | 47 | 355 | - | - | |
Chy04g00085 | 386 | ProSiteProfiles | PPC domain profile profile. | 177 | 318 | IPR005175 | - | |
Chy04g00085 | 386 | Gene3D | - | 192 | 310 | - | - | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 77 | 98 | - | - | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 340 | 368 | - | - | |
Chy04g00085 | 386 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 192 | 298 | - | - | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Chy04g00085 | 386 | CDD | DUF296 | 192 | 296 | IPR005175 | - | |
Chy04g00085 | 386 | MobiDBLite | consensus disorder prediction | 117 | 138 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy04g00085 | Chy06g02136 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00085 | Chy-Chr4:857773 | Chy03g01005 | Chy-Chr3:13564868 | 1.11E-44 | dispersed | |
Chy04g00085 | Chy-Chr4:857773 | Chy06g02136 | Chy-Chr6:25703791 | 1.12E-89 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g00085 | - | - | csv:101205370 | 597.816 |