Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g00130 | ATGGGTGGCAGTGAGATGAATAAACCCGCAAAGGAAGAATCCAAAACAGCACCTGCCACTACGCAGGAACAGTCTCCAAATACAAGCACGGGCACTGTTAATCCTGAATGGTCAGGATTTCAGGCATATTCTCCAATACCTCCACCTGGATATTTGGCAACAAGCCCCCAAGCACACCCGTATATGTGGGGGGTACAGCCTATTATGCCCGCTTACGGAACCCCTCCACATCCATATGTTGCAATGTATCCTCATGGTGGCATATATGCTCATCCACCTATGCCTCCTGGATCGTATCCTTACAGTCCTTTTGCTATCGCTTCTCCAAATGGCATTGCTGAGGCTTCTGGGAATACACCAAGCAACATGGAAGGGGAAGGTAAACCATCTGAGCTGAAAGAAAAATTGCCAATTAAAAGATCGAAAGGAAGTCTGGGAAGTTTAAGCATGATAACTGGGAAGAACAATGAGCTTGGTAAACCATCAGGAACATCTGCTAATGGAGTATATTCTAAAAGTGCTGAAAGTGAAAGTGAAGGCACGAGTGAAAGAAGTGATGCTGACTCTGAAAATGATTCACAACTAAAATCTGGTTCTGGGAAAGATTCTTTAGAAGGTGGAGGGACTCCTAATGGTTTGATGCATGGTTCTCAGAATGAAGGACATAGTCTTGCACATCCATTGGTGAACCAAACGATGTCCATAATACCTATCCAAGCTTCTGGAGCTGTTACAGGTCCTGCTACAAATTTGAATATAGGAATGGATTATTGGTGTACCCCAACAACTTCTGCCATTTCTTCATTGTGTGGGAAGGTTCCTTCAGCACCAGTTGCAGGAGCTGTTGCTGCTGGGTCACGAGACGGCATTCCGTCACAGCCTTGGTTACAGGATGAAAGAGAGCTAAAAAGACAAAGAAGGAAGCAATCAAATAGAGAATCTGCTCGTAGATCTCGGTTGCGTAAACAGGCTGAATGCGATGAACTATCTCAACGTGCCGAAGCTTTGAAGGAAGAAAATGCTAGTCTAAGATCTGAAGTGGATAGGATTAGGACTGAGTACGAGCAACTTCTTTCAGAAAATGCCTCACTCAAGAGGAGGCTTGGCGAAAGTGATGGAAATGAAGATCCAAGATCTACCAAAGATGGCCAAAATTTGAAAAAAGGTCATCATACATCCCGGACCCAACTTGCTAAGGGGTAA | 1203 | 44.56 | MGGSEMNKPAKEESKTAPATTQEQSPNTSTGTVNPEWSGFQAYSPIPPPGYLATSPQAHPYMWGVQPIMPAYGTPPHPYVAMYPHGGIYAHPPMPPGSYPYSPFAIASPNGIAEASGNTPSNMEGEGKPSELKEKLPIKRSKGSLGSLSMITGKNNELGKPSGTSANGVYSKSAESESEGTSERSDADSENDSQLKSGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSIIPIQASGAVTGPATNLNIGMDYWCTPTTSAISSLCGKVPSAPVAGAVAAGSRDGIPSQPWLQDERELKRQRRKQSNRESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRTEYEQLLSENASLKRRLGESDGNEDPRSTKDGQNLKKGHHTSRTQLAKG* | 401 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1169547 | 1178651 | - | Chy4G068480.1 | Chy04g00130 | 224029 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 113 | 223 | - | - | |
Chy04g00130 | 400 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 301 | 364 | IPR004827 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 177 | 191 | - | - | |
Chy04g00130 | 400 | Pfam | bZIP transcription factor | 299 | 361 | IPR004827 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | Gene3D | - | 302 | 358 | - | - | |
Chy04g00130 | 400 | Coils | Coil | 312 | 367 | - | - | |
Chy04g00130 | 400 | CDD | bZIP_plant_GBF1 | 304 | 354 | IPR045314 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 359 | 400 | - | - | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 14 | 39 | - | - | |
Chy04g00130 | 400 | SUPERFAMILY | Leucine zipper domain | 302 | 358 | IPR046347 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | Pfam | G-box binding protein MFMR | 1 | 95 | IPR012900 | - | |
Chy04g00130 | 400 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 306 | 321 | IPR004827 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 299 | 327 | - | - | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 1 | 46 | - | - | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 365 | 389 | - | - | |
Chy04g00130 | 400 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 1 | 392 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Chy04g00130 | 400 | PANTHER | BZIP TRANSCRIPTION FACTOR 68 | 1 | 392 | - | - | |
Chy04g00130 | 400 | SMART | brlzneu | 299 | 363 | IPR004827 | GO:0003700|GO:0006355 | |
Chy04g00130 | 400 | MobiDBLite | consensus disorder prediction | 145 | 176 | - | - | |
Chy04g00130 | 400 | Pfam | Disordered region downstream of MFMR | 134 | 266 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy04g00130 | Chy06g02175 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g00666 | Chy-Chr2:4041247 | Chy04g00130 | Chy-Chr4:1169547 | 4.28E-64 | dispersed | |
Chy04g00130 | Chy-Chr4:1169547 | Chy10g01085 | Chy-Chr10:15951534 | 5.16E-11 | dispersed | |
Chy04g01946 | Chy-Chr4:25356021 | Chy04g00130 | Chy-Chr4:1169547 | 2.54E-08 | transposed | |
Chy06g00123 | Chy-Chr6:815385 | Chy04g00130 | Chy-Chr4:1169547 | 2.48E-45 | transposed | |
Chy04g00130 | Chy-Chr4:1169547 | Chy06g02175 | Chy-Chr6:26032096 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17794 | PF16596 | MFMR_assoc | 9.40E-46 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g00130 | K09060 | - | csv:101214217 | 782.326 |