Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00155 ATGGAAGGACCCGAATATTTCCAGCCCGGTTTTTCCTCTCAATTTTCTACCGAAGGCCGTCAGTCCTCCGATGTAAATAAAACTATCACCTCCGCCGCACCTCCCACTACTGCCGACCATTTCATCGTCGAGGACCTTTTGAACTTCTCTAATGACGATGACGTTGTCTTCACCGATGGAACTTTCGATAACCAAACCCCTACTTCTACCGATTCTTCCACTCTTACCTTACTCGATTCATGCAATTCTTACCCCAATACCGGCAATGCCCACAACTATCATTTCGCCGACGCTAATTTCTCCACGGACCTTGGTGTTCCGTACGATGACTTGGCCGAGCTGGAATGGCTTTCAAATTTCGTGGAAGATTCTTTCTCCACCGACGATTTGGAGAAGCTGAGTTTGATTTCCGGGATGAATTCCCGGGCCGACGTCCATGACGATGACGCCTCAAAAGCTCGAGAATTTCAGACCGGATTCAACCGGAACCATTCACCAGGTTTTCGCCACGAAATGTCCGTAGTTCCGGCGAAAGCCGCTCGTAGCAAACGGTCTAGGGCGGCGCCTTGCATATGGAATTCCCGATTATCCGTACTCTCTCCCACAAATTCCTCTTCCGAAACCGACGTTGTCGTCACGCTTACGCCACATCCAAACACCGCCAAGAAAACCACGAAGAAGAAAGAAATTCCGGATGACACGTCGTCCGCCGCCGGTAATAACGGGGAAGGACGTAAGTGTCTCCATTGTGCCACCGACAAAACGCCCCAGTGGCGAACGGGACCAATGGGTCCAAAGACGTTGTGTAATGCTTGTGGGGTCCGGTACAAATCCGGTCGTTTGGTACCGGAATACCGACCGGCGGCGAGCCCGACGTTTGTACTGACAAAACACTCAAATTCTCACCGGAAGGTTATGGAACTGCGGCGACAAAAGGAAATGATGAGAGCACAGCAACAACAACAGTATCTTCATCATGAGAGTATGGGGTTTGATCATGTATCAAACGACGACGATTATTTGATCCATCAACACATAGGCCCACTCTATCAATAG 1056 49.91 MEGPEYFQPGFSSQFSTEGRQSSDVNKTITSAAPPTTADHFIVEDLLNFSNDDDVVFTDGTFDNQTPTSTDSSTLTLLDSCNSYPNTGNAHNYHFADANFSTDLGVPYDDLAELEWLSNFVEDSFSTDDLEKLSLISGMNSRADVHDDDASKAREFQTGFNRNHSPGFRHEMSVVPAKAARSKRSRAAPCIWNSRLSVLSPTNSSSETDVVVTLTPHPNTAKKTTKKKEIPDDTSSAAGNNGEGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVMELRRQKEMMRAQQQQQYLHHESMGFDHVSNDDDYLIHQHIGPLYQ* 352
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1375627 1376773 - Chy4G068730.1 Chy04g00155 224054
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00155 351 MobiDBLite consensus disorder prediction 218 242 - -
Chy04g00155 351 MobiDBLite consensus disorder prediction 1 30 - -
Chy04g00155 351 CDD ZnF_GATA 246 293 IPR000679 GO:0006355|GO:0043565
Chy04g00155 351 PANTHER GATA TRANSCRIPTION FACTOR 1 350 - -
Chy04g00155 351 ProSitePatterns GATA-type zinc finger domain. 247 272 IPR000679 GO:0006355|GO:0043565
Chy04g00155 351 Gene3D - 242 326 IPR013088 GO:0006355|GO:0008270
Chy04g00155 351 PANTHER GATA TRANSCRIPTION FACTOR 1 350 - -
Chy04g00155 351 PIRSF Txn_fac_GATA_plant 25 337 IPR016679 GO:0003677|GO:0005634|GO:0045893
Chy04g00155 351 Pfam GATA zinc finger 247 280 IPR000679 GO:0006355|GO:0043565
Chy04g00155 351 ProSiteProfiles GATA-type zinc finger domain profile. 241 277 IPR000679 GO:0006355|GO:0043565
Chy04g00155 351 MobiDBLite consensus disorder prediction 9 30 - -
Chy04g00155 351 SMART GATA_3 241 291 IPR000679 GO:0006355|GO:0043565
Chy04g00155 351 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 242 305 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Chy03g01261 Chy04g00155 CCT
Chy03g01261 Chy04g00155 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01261 Chy-Chr3:15664740 Chy04g00155 Chy-Chr4:1375627 5.30E-117 dispersed
Chy04g00155 Chy-Chr4:1375627 Chy04g00936 Chy-Chr4:13453297 1.25E-94 dispersed
Chy04g00155 Chy-Chr4:1375627 Chy01g02263 Chy-Chr1:27058358 3.77E-95 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17797 PF00320 GATA 3.20E-15 CL0167 Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00155 - - csv:101221905 669.463