Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g00184 | ATGGAGCTGAATGAACACTATTTGTTAGAAGAAGTTTTGGGTTTGAGAAGATCAGAAGTAATGAATTGGGAATTGGCAATCGCACCAGAAATGAATGGGTGGAATTTTGATTGTTCTGATTCTTTGCCAATGGATCAGCAGCACAATGATCTCACTTATCTTCTGAATGGGGAAGATCAGTATTTAGGCACAGAGGCGGCGATGGCAGCGGCGGGGAGCACGGGGGATTCGATGTCGTATAGTACGATGGCGGAGACGCCGGGGGGGAGTAGTTTTGAGGTTTATAATATTAGGAGTATGGAAGAGGAGGAACTTGGGATTTTGGAGGATGAGATTCATAATCTTGAAGTTCAAGCTAACAATGATTCATATTATTGTAAAGTTGAGCCTGTTGCTGTTGATCAATCTCCTGAAAAAATGCTACCTATTTTCAAAACGGGTGGTAGTAAGAAACTTCAGGGGCAGCCCTCCAAGAATCTCATGGCGGAGAGACGGCGGAGGAAGCGACTCAACGATCGCCTCTCTATGCTCAGATCCATTGTCCCCAAAATCAGCAAGATGGATAGAACTGCGATTCTTGCGGATGCAATTGAGTACGTGAAGGAACTGATGGAGAGAATCCAAATTTTGGAAAAGGAAATTAGTAATTCAAATAAGTTGGGGATTTTGAGATCACATATTGTGAAACCAAATAATAATGAATATTTGGTGAGAAATTCAGCTAAGTTTAATGTGGAAAGAAGAGAAGAAGAAACAAAGATTGAGATATGTTGTGCAGCAAAGCCAGGGTTATTATTGTCAACAGTAAACACTCTTGAAGCTATGGGACTTGACATTCAACACTGTGTTATTAGCTGTTTCAATGACTTTGCAATTCAAGCTTCTTGTTCTCCGGGAAATGAGGTTGGAAGAATGGTGAGCACAGAAGAAGTAAAGCAAGCCTTATTTGAAAATGCTGGATATGGAGGAAAGTGCTTGTAG | 981 | 41.28 | MELNEHYLLEEVLGLRRSEVMNWELAIAPEMNGWNFDCSDSLPMDQQHNDLTYLLNGEDQYLGTEAAMAAAGSTGDSMSYSTMAETPGGSSFEVYNIRSMEEEELGILEDEIHNLEVQANNDSYYCKVEPVAVDQSPEKMLPIFKTGGSKKLQGQPSKNLMAERRRRKRLNDRLSMLRSIVPKISKMDRTAILADAIEYVKELMERIQILEKEISNSNKLGILRSHIVKPNNNEYLVRNSAKFNVERREEETKIEICCAAKPGLLLSTVNTLEAMGLDIQHCVISCFNDFAIQASCSPGNEVGRMVSTEEVKQALFENAGYGGKCL* | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 1633605 | 1636397 | - | Chy4G069020.1 | Chy04g00184 | 224083 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g00184 | 326 | CDD | ACT_UUR-ACR-like | 252 | 293 | - | - | |
Chy04g00184 | 326 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 158 | 216 | IPR036638 | GO:0046983 | |
Chy04g00184 | 326 | Gene3D | - | 150 | 219 | IPR036638 | GO:0046983 | |
Chy04g00184 | 326 | SMART | finulus | 160 | 209 | IPR011598 | GO:0046983 | |
Chy04g00184 | 326 | Coils | Coil | 98 | 118 | - | - | |
Chy04g00184 | 326 | Pfam | Helix-loop-helix DNA-binding domain | 160 | 203 | IPR011598 | GO:0046983 | |
Chy04g00184 | 326 | Coils | Coil | 193 | 220 | - | - | |
Chy04g00184 | 326 | PANTHER | - | 2 | 77 | - | - | |
Chy04g00184 | 326 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 2 | 77 | - | - | |
Chy04g00184 | 326 | PANTHER | - | 81 | 326 | - | - | |
Chy04g00184 | 326 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 154 | 203 | IPR011598 | GO:0046983 | |
Chy04g00184 | 326 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 81 | 326 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy03g01286 | Chy04g00184 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy03g00211 | Chy-Chr3:1980537 | Chy04g00184 | Chy-Chr4:1633605 | 1.71E-08 | dispersed | |
Chy04g00184 | Chy-Chr4:1633605 | Chy12g01144 | Chy-Chr12:16365054 | 2.57E-38 | dispersed | |
Chy02g00781 | Chy-Chr2:4839171 | Chy04g00184 | Chy-Chr4:1633605 | 2.73E-85 | wgd | |
Chy03g01286 | Chy-Chr3:15895293 | Chy04g00184 | Chy-Chr4:1633605 | 5.50E-83 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17800 | PF00010 | HLH | 5.60E-10 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g00184 | - | - | csv:101222621 | 625.935 |