Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00211 ATGTTCCCAAAGCCCCACCACCAACCACCGTCCCATTCTCAGCCTTTCCCCCGTTCCTTTCCCGTCACCGCCACTCCACCGCCAAGAGATTCACCCGATGACGATTCCCCCGCCGCACCTTCCCCTCTCACTCACGCCATCGTCCTTAAAGAACCGCCCTCCTCCGCTGACGGAGCTTCCATCGAGGTTGTCCGTCGCCCCCGTGGCCGTCCTCCTGGATCCAAGAACAAGCCAAAGCCGGCGGCCGTCGTTGTCGGCGGCCGTGACGCCGAGCCGCCGATGAGTCCCTACGTTCTTGAAGTCCCCGGCGGTAGCGATATCGTCGAAGCTATTTCCCGATTTTGCCGCCGCAGGAACACAGGGCTTTGTATTCTCAACGCTTACGGAACAGTCGGTGACGTCACTCTCCGACAGCCGGCTTCGTCTCCGGTCGGTACCGTCACTTTCCATGGACGATTTGATATTCTTTCCGTTTGCGCTACCTTTGTTCCCCAAACGACTTCGTTCCCAATTCCTAACGGATTCACCATCACGCTAGCGGGACCACAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGATCTTTAATCGGCGTTGGAACCGTCTATGTAATCGCCGCCTCGTTCAACAATCCATCGTATCAACGGCTACCGTCGGAGGACGAAGTCAGAAAATTAACGTTCAGCGATGTGGAAGAAGGCCACTCGCCGATCTCCGGCGGGAAAGATAAGGAAAACACCGCCGCAGGCGGCGCCCAAGAGACTTGCGGTTTGCTGCCGATGTACAGCACTCACTCATCTTCGGACGTAATATGGACTCCGGCGGCCAGACAACCGGCGCACCACCATCGCCAGTACTAA 858 58.28 MFPKPHHQPPSHSQPFPRSFPVTATPPPRDSPDDDSPAAPSPLTHAIVLKEPPSSADGASIEVVRRPRGRPPGSKNKPKPAAVVVGGRDAEPPMSPYVLEVPGGSDIVEAISRFCRRRNTGLCILNAYGTVGDVTLRQPASSPVGTVTFHGRFDILSVCATFVPQTTSFPIPNGFTITLAGPQGQIFGGLVAGSLIGVGTVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEGHSPISGGKDKENTAAGGAQETCGLLPMYSTHSSSDVIWTPAARQPAHHHRQY* 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1926956 1927813 + Chy4G069290.1 Chy04g00211 224110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00211 285 ProSiteProfiles PPC domain profile profile. 91 231 IPR005175 -
Chy04g00211 285 MobiDBLite consensus disorder prediction 1 35 - -
Chy04g00211 285 MobiDBLite consensus disorder prediction 1 83 - -
Chy04g00211 285 Gene3D - 95 234 - -
Chy04g00211 285 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 220 - -
Chy04g00211 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 278 IPR014476 GO:0003680
Chy04g00211 285 MobiDBLite consensus disorder prediction 230 249 - -
Chy04g00211 285 CDD DUF296 96 208 IPR005175 -
Chy04g00211 285 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 10 278 - -
Chy04g00211 285 Pfam Plants and Prokaryotes Conserved (PCC) domain 96 210 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00211 Chy-Chr4:1926956 Chy05g00341 Chy-Chr5:3529987 4.34E-41 dispersed
Chy03g01303 Chy-Chr3:16017193 Chy04g00211 Chy-Chr4:1926956 4.45E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00211 - - zju:107421268 296.975