Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00220 ATGGCGTCCCCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTATCCAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCACTTCATGCAAAAGCTTGTATTGACCTCCACTCCTGCCTCCGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTTGCATACAAGAACGTGATCGGTTCTCTCCGAGCGGCTTGGCGCATCGTATCCTCCATTGAACAGAAGGAGGAAGGAAGGAAGAACGAAGATCATGTCGTCCTCGTCAAAGATTATAGATCCAAGGTCGAATCCGAACTCACCGAGGTCTGCGCCAATATTTTGAAGCTTTTGGACTCCAATCTCATACCATCTTCGTCCTCTGGTGAATCTAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTATTTGGCTGAGTTTAAGATTGGGGAGGAGAGGAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGTTCCCCTCTGATAAATTCTATATTATGGAGGATATTGCAGTTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGTCTGATAAAGCTTGTAGCATGGCCAAACAGGCATTTGAAGAAGCGATTGCGGAATTGGACACATTAGGTGAGGAATCATACAAGGATAGCACCCTGATCATGCAACTCTTAAGAGACAATCTCACCCTTTGGACTTCGGATTCGCAGGACCAGTTAGACGAGCCATAG 789 47.53 MASPIPENLTREQYVYLSKLSEQAERYEEMVHFMQKLVLTSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTEVCANILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMLAYKAAQFPSDKFYIMEDIAVADLAPTHPIRLGLALNFSVFYFEILNQSDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDSQDQLDEP* 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 1986377 1989823 + Chy4G069380.1 Chy04g00220 224119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00220 262 Coils Coil 17 37 - -
Chy04g00220 262 Gene3D - 2 261 IPR036815 -
Chy04g00220 262 PANTHER BNAC02G00320D PROTEIN 8 258 - -
Chy04g00220 262 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Chy04g00220 262 PANTHER 14-3-3 PROTEIN 8 258 IPR000308 -
Chy04g00220 262 Pfam 14-3-3 protein 19 252 IPR023410 -
Chy04g00220 262 ProSitePatterns 14-3-3 proteins signature 2. 234 253 IPR023409 -
Chy04g00220 262 SUPERFAMILY 14-3-3 protein 10 254 IPR036815 -
Chy04g00220 262 SMART 1433_4 11 261 IPR023410 -
Chy04g00220 262 PIRSF 14-3-3 6 261 IPR000308 -
Chy04g00220 262 PRINTS 14-3-3 protein zeta signature 171 197 IPR000308 -
Chy04g00220 262 PRINTS 14-3-3 protein zeta signature 198 224 IPR000308 -
Chy04g00220 262 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Chy04g00220 262 PRINTS 14-3-3 protein zeta signature 225 254 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g01292 Chy-Chr3:15935736 Chy04g00220 Chy-Chr4:1986377 1.11E-134 dispersed
Chy04g00220 Chy-Chr4:1986377 Chy04g00245 Chy-Chr4:2195752 7.66E-134 dispersed
Chy04g00220 Chy-Chr4:1986377 Chy03g01354 Chy-Chr3:16443954 1.01E-133 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00220 K06630 - csv:101206352 473.011