Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00245 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCTAAGCTTGCCGAGCAAGCTGAGCGTTACGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGATAACGAGGAACTCACCGTTGAGGAGCGGAATCTTCTTTCTGTTGCTTACAAGAATGTTATTGGAGCACGTAGAGCTTCTTGGAGGATTATTTCCTCCATTGAACAGAAAGAAGAGAGCCGAGGGAATGATGATCATGTCTCTGTCATCCGTGGTTACAGATCCAAGATCGAGACTGAGCTTTCTAACATTTGTGATGGCATCCTTAAACTTCTTGACTCTCGTCTTATTTCCTCTGCTGCTTCTGGTGATTCCAAGGTTTTTTATCTTAAGATGAAGGGCGATTATCATAGATACCTTGCTGAATTTAAGACCGGAGCTGAAAGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCTCAGGATATTGCAAATTCTGAACTTGCTCCTACTCACCCTATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGCGCTTGCAGCCTTGCTAAACAGGCTTTCGATGAAGCAATCGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCAGACATGCAGGACGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGCGATGATGAATAG 777 45.56 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIRGYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANSELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE* 259
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2195752 2197683 - Chy4G069630.1 Chy04g00245 224144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00245 258 PANTHER 14-3-3-LIKE PROTEIN GF14 CHI-RELATED 4 253 - -
Chy04g00245 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Chy04g00245 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Chy04g00245 258 PANTHER 14-3-3 PROTEIN 4 253 IPR000308 -
Chy04g00245 258 PIRSF 14-3-3 2 250 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Chy04g00245 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Chy04g00245 258 Coils Coil 14 34 - -
Chy04g00245 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Chy04g00245 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Chy04g00245 258 Gene3D - 1 252 IPR036815 -
Chy04g00245 258 SMART 1433_4 8 250 IPR023410 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01354 Chy04g00245 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00220 Chy-Chr4:1986377 Chy04g00245 Chy-Chr4:2195752 7.66E-134 dispersed
Chy04g00245 Chy-Chr4:2195752 Chy07g00921 Chy-Chr7:13090532 1.41E-159 dispersed
Chy03g01292 Chy-Chr3:15935736 Chy04g00245 Chy-Chr4:2195752 4.76E-20 transposed
Chy03g01354 Chy-Chr3:16443954 Chy04g00245 Chy-Chr4:2195752 2.08E-173 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00245 K06630 - csv:101210822 499.204