Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00255 ATGGCGAAAGAGAGAGAACTACTCGTTTACTCTGCTAAATTGGCTGAACAAGCTGAGAGATATGAAGGCATGATATTTTTGAATCATTATTGCCTTTTCCATGCTTCAGAGATGGTTGAGGAAATGAAGAAAATTACGAAGTTAAATGTGGAATTGACAGTGGAAGAGAGAAATCTGCTATCTGTTGGCTATAAGAATGTAATAGGAGCTAGACGAGCTTCCTGGCGTATTTTGTCTTCAATTGAACAGAAGGAAACTACCAAACATAATGAGAAGAACGTGGAGCGGATAATTGGTTACAGGCATGGGGTTGAAGATGAGCTCTCTAAAATATGCAGTGATATATTGTCAATCATTGACCAGCATCTCCTTCCATGTTCCTCAGCTGGAGAATCTACTGTGTTCTACCATAAGATGAAAGGAGACTACTGTCGGTATTTGGCTGAGTTTAAATCCGGTGATGAGCATAAACAAGTTGCGGATCAGTCATTAAAGTCTTACGAGGCAAGTTTATTTCCTGCTGCTTCTGCAATTGCTAACTCTGATTTGTCTCCAACTCATCCTATAAGACTTGGCTTGGCTCTGAACTTCTCTGTTTTCTACTACGAGATATTGAATTCCCCTGAAAGGGCCTGCCACCTTGCTAAGCAGGCCTTTGATGAGGCTATTGCAGAACTTGACAGTCTCAATGAGGAATCCTACAAGGACATTACCCTTATTATGCAGCTCCTTAGGGACAATCTAACTCTGTGGACATCCGATCTTGCAGACGAAGGTGGAGAGCAGTCCAATGCCGATGAACTTTAG 807 41.76 MAKERELLVYSAKLAEQAERYEGMIFLNHYCLFHASEMVEEMKKITKLNVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKETTKHNEKNVERIIGYRHGVEDELSKICSDILSIIDQHLLPCSSAGESTVFYHKMKGDYCRYLAEFKSGDEHKQVADQSLKSYEASLFPAASAIANSDLSPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYKDITLIMQLLRDNLTLWTSDLADEGGEQSNADEL* 269
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2267948 2270572 + Chy4G069730.1 Chy04g00255 224154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00255 268 Gene3D - 1 265 IPR036815 -
Chy04g00255 268 SMART 1433_4 5 265 IPR023410 -
Chy04g00255 268 Coils Coil 212 232 - -
Chy04g00255 268 PANTHER 14-3-3-LIKE PROTEIN GF14 OMICRON 3 267 - -
Chy04g00255 268 ProSitePatterns 14-3-3 proteins signature 1. 57 67 IPR023409 -
Chy04g00255 268 PRINTS 14-3-3 protein zeta signature 225 254 IPR000308 -
Chy04g00255 268 PRINTS 14-3-3 protein zeta signature 51 80 IPR000308 -
Chy04g00255 268 PRINTS 14-3-3 protein zeta signature 100 124 IPR000308 -
Chy04g00255 268 PRINTS 14-3-3 protein zeta signature 131 153 IPR000308 -
Chy04g00255 268 PRINTS 14-3-3 protein zeta signature 198 224 IPR000308 -
Chy04g00255 268 Pfam 14-3-3 protein 36 252 IPR023410 -
Chy04g00255 268 PANTHER 14-3-3 PROTEIN 3 267 IPR000308 -
Chy04g00255 268 PIRSF 14-3-3 1 265 IPR000308 -
Chy04g00255 268 SUPERFAMILY 14-3-3 protein 4 254 IPR036815 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01367 Chy04g00255 CCT
Chy03g01367 Chy04g00255 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00255 Chy-Chr4:2267948 Chy07g00921 Chy-Chr7:13090532 3.32E-113 dispersed
Chy01g00337 Chy-Chr1:2449352 Chy04g00255 Chy-Chr4:2267948 6.09E-125 transposed
Chy03g00712 Chy-Chr3:9626076 Chy04g00255 Chy-Chr4:2267948 2.28E-122 transposed
Chy03g01367 Chy-Chr3:16528069 Chy04g00255 Chy-Chr4:2267948 7.33E-72 transposed
Chy10g01053 Chy-Chr10:15730984 Chy04g00255 Chy-Chr4:2267948 1.34E-131 transposed
Chy03g01366 Chy-Chr3:16525667 Chy04g00255 Chy-Chr4:2267948 1.65E-56 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00255 K06630 - csv:101213169 464.151