Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00284 ATGGCTCATAAAGTAGATCTGCTTTTACTGATCTTATTTCTAGTCTGGTGCTGTAACACCTCTTCTAGTACCAGTCCCGAGGCCGAAATTCTCATCAAGTTCAAGAGCTCTCTTTCACACAACCCTGCCTTGGACAATTGGAACGTGTCCATCAACATCTGCGACGATGATGCAAAAACTACAGGTTTCTGGACTGGTGTGACTTGTAAAGATGGAGCTCTGTTTGGGTTACGGCTAGAGAACATGAGCTTAAGCGGGTTTATCGACATAGACGTGCTCGTGAACTTGACATCTCTAAGAAGCTTAAGCTTCATGAACAATAGCTTTCATGGTTCGATGCCTCCTGTTAGAAAACTGGGAGCATTAAGAGCTTTATATCTTGCATACAACAAATTCTCTGGTACAATACCTGATGATGCTTTTCAAGATATGAGGTCTCTGAAAACGGTGCGTTTAGAAGAGAATGCGTTCAAAGGAGGAATTCCAAGTTCCCTCTCTAGCTTGCCAGCATTAGTGGAATTAAGCCTTGAAGGGAATAGATTTGAAGGCAGAATCCCTGATTTTATACCAAGGGATTGGAAGTTGTTTGATTTGTCCAATAACCAATTGGAGGGTTCAATCCCTTCTGGCTTAGCCAATATCGACCCCATTGCTTTTGCAGAAATCAAATTTAGATCAAAACCACATGTGGCCAAACAGATAACTAAGATGAAAATTCATCTGTCTCCCATAGGGAATAACGAATTATGTGGAAAACCACTTAGCCGATGCAAATCTCCAAATAAATGGTACATCCTCATCGGAGTCACCGTCGGAATCATCTTCTTAGCGATCGCTGTCATTTCGCATCGCTATCGCCGCCGCAAGGCTTTACTATTAGCAGCGGAAGAAGCCCACAACAAATTGGGCCTGTCAAAGGTCCAATATCAAGAACAGACAGGAGAAAACGCGAAGCTCCAATTCGTTCGGGCCGACAGGCCCATATTTGACTTAGAGGAGCTGTTGACGGCCCCAGCAGAAGTATTGGGCGGTGGAAGCTTTGGGTCGTCTTATAAGGCCCTACTTTCAAATGGGCCTCCGGTGATTGTGAAAAGGCTTCGGCCCATGAGATGCGTTGGATTCGAGGAATTTCATGAGCATATGAAAAAACTTGGCTCAATTTCACATACTAATTTGCTTCCTCCTCTGGCTTTCTATTATAGAAATGAAGATAAACTTCTGATTTCGGAGTTCGTGGGGAATGGGAACTTAGCTGATCATCTTCATGGCCAAGCTCAGCGTACGCCTGGAAATATTGGGCTGGACTGGCCGACGCGATTACGGATCATAAAAGGAGTGGGCCGAGGGCTGGCCCATTTACATAGAGCATTACCGAGCCTGAGCCTACCACACGGCCACTTAAAATCCTCCAACATTCTTCTTAACAGCAACTACGAGCCTCTATTAACCGATTTCGGCCTGGATCCTCTAGTTTGCCATGACCAATGCCATCAATTCATGGCAGCCTACAAGTCGCCGGAGTACATCCGGCACCGCCGAGTCTCCAGAAAGACCGACGTGTGGAGCCTCGGAATTCTGATCCTGGAGCTTCTGACAGGGAAGTTTCCGGCGAACTATCTGAGGCAGGGAGGAGGTACGGGGAACGGAGACCTGGCGGCGTGGGTGAAGTCGGCGGTGAGGGAGGAGTGGACGGCGGAGGTATTCGATGGGGATATGATGAAGGGAACGAAGAACGAAGACGGGGAAATGGTGCGGTTGTTAAGGATCGGCATGAATTGCAGTGAAGAGGAGGAAGATCAACGTTGGGGATTGAAGGAGGCGGTGGAGAAGATTGAGGAATTGAAGGAGACAGAAATTTCTACTGATGATGAATTTTATTCGTCTTATGGTAGTGAAGTTGAAAACTTTGGCAAAAATTTAAGGACGTCGATAGAAAGTTATGATAAAACAAAGAAACTTGCAGCTATTCAATGCAAAGATATTGTGTTAGAAGATACAGATGTAGCAAAGGCCATAATTGAATATGCTGCAAATACAACCATAGAGAATATTGTTGTGGGTGCTTCAGCCAAATCTGGCTTCTTAAGATTCAAGGTAACTGATATTCCTGGCAGTATAGTAAAAGGAGCACCAGATTTTTGTAATGTGTTTGTCATTTCTAAAGGCAAAATTCAAACGATGCGTTCGGCATCTCGTCCTGCTCCAGCGGTTAGTGCTCTACGAGGTCAATTAGCACAACAAAGCAGCACAAAATTATCCGATACGCCCGACTTCCCTATCTCTCACTCGGCAACTGCAAGAGTGTCTTTGGATAAGCCACCTCTTGATCTGCCTAATAAATCGCAAGACGAAGCCGATTACATGAGGTCCCCATTCACAAGGAAAGGATATAATTACAAACCATCATATGGAGATTTGCCGATGCAAGATTCAGATATATCTTTCGTTAGCTCGGGAAGACCGAGCATCGATCGTATATTTCCGACCCTTTATGAGAGTCAAGATATGGGAGGAAGAGCCACACCACCACAGATTTCAAGCAGTACAGATCTTGACTTGACTCGCAGCTTTGAGTCTCTGCAGTTGGGACGAATGTCGGTCGATATGAACTTTCCGTCCGAGTTCTCTTCGATCTCGCAAGATAGCGATAGATTGTCTATCTCATCACAGTCGATGGAAGATGTAGAGGCCGAAATGCGTAGACTGAAGTTAGAACTCAAGCAAACCATGGAAATGTACAGCACAGCCTGCAAAGAAGCTCTTACAGCAAAACAAAAGGCGGTCGAGCTACAACGCTGGAAATTGGAAGAAGAACAAAGATTAGAAGAGGCGAGATTGGCGGGGGAAGCTGCATTGGCATTAGCTGAACAAGAGAAGGCCAAGTCGAAAGCAGCCGTGGAAGCAGCTGAAGCTGCTAGAAGAATTGCAGAATTAGAAGCACAGAAGAGAATGAAAGCTGAAATGAAAGCACTGAAAGAAGCTGAAGAGAAGAAAAAAGCATATGATGCATTGGCACAAACTGATAATATCAGGTATAGAAAGTATACGATCGAGGAGATCGAAGCAGCAACAGAATTCTTCTCCGAATCTCGTAGGATTGGAGAAGGAGGGTATGGTCCTGTTTACAAGTGTGATCTTGATCATACTCCTGTTGCTATTAAGGTTCTACGTCCGGATGCGACTCAAGGACGATCACAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGCCATCCAAACATGGTTCTCCTACTCGGAGCTTGCCCCGAGTACGGCTGCTTGGTATATGAGTTCATGGCTAATGGAAGCTTAGAAGATCGACTTCTACGACGAGGAAACACACCTCCACTTTCGTGGCACGTAAGGTTTAAAATTGCAGCTGAAATTGGAACAGCATTGTTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCATCGTGATCTGAAACCAGCTAACATCCTTCTCGATCGTAACTTTGTCAGTAAGATCAGTGATGTTGGGTTGGCTCGGCTTGTACCACCATCGATTGCCGATAGCGTAACACAATACCGAATGACATCAACTGCTGGAACATTTTGCTACATTGATCCAGAGTATCAACAAACAGGTATGCTCGGTGTAAAATCCGACATATACTCACTAGGCATCATGTTTCTCCAATTGATAACTTCTAGGCCACCAATGGGGTTGACTCACCATGTCGAAAGATCTATCGAGAAGGGTATGTTCGATACTATTCTCGACCCCGTCATCACCGATTGGCCTATTGAAGAAGCTTTGTCTTTTGCAAAGTTGTCGCTCAAATGTGCTGAGTTAAGACGTAAAGACAGGCCGGATCTTGGGAAGGTTATCCTTCCAGAGCTTAACAGGTTGAGAGCTATTGCAGAAGATACAATGCATCCAACACTGATGGGAGACACAAGCCCTTCTCGCAGCAGCAGCCAAGTTTCTCTTCAGTTGGGAGCAATGGCTTCATCTCCGCAATCATATAACAGCTCGAGAAATCCATCGGCTAATTTTTGA 4029 45.15 MAHKVDLLLLILFLVWCCNTSSSTSPEAEILIKFKSSLSHNPALDNWNVSINICDDDAKTTGFWTGVTCKDGALFGLRLENMSLSGFIDIDVLVNLTSLRSLSFMNNSFHGSMPPVRKLGALRALYLAYNKFSGTIPDDAFQDMRSLKTVRLEENAFKGGIPSSLSSLPALVELSLEGNRFEGRIPDFIPRDWKLFDLSNNQLEGSIPSGLANIDPIAFAEIKFRSKPHVAKQITKMKIHLSPIGNNELCGKPLSRCKSPNKWYILIGVTVGIIFLAIAVISHRYRRRKALLLAAEEAHNKLGLSKVQYQEQTGENAKLQFVRADRPIFDLEELLTAPAEVLGGGSFGSSYKALLSNGPPVIVKRLRPMRCVGFEEFHEHMKKLGSISHTNLLPPLAFYYRNEDKLLISEFVGNGNLADHLHGQAQRTPGNIGLDWPTRLRIIKGVGRGLAHLHRALPSLSLPHGHLKSSNILLNSNYEPLLTDFGLDPLVCHDQCHQFMAAYKSPEYIRHRRVSRKTDVWSLGILILELLTGKFPANYLRQGGGTGNGDLAAWVKSAVREEWTAEVFDGDMMKGTKNEDGEMVRLLRIGMNCSEEEEDQRWGLKEAVEKIEELKETEISTDDEFYSSYGSEVENFGKNLRTSIESYDKTKKLAAIQCKDIVLEDTDVAKAIIEYAANTTIENIVVGASAKSGFLRFKVTDIPGSIVKGAPDFCNVFVISKGKIQTMRSASRPAPAVSALRGQLAQQSSTKLSDTPDFPISHSATARVSLDKPPLDLPNKSQDEADYMRSPFTRKGYNYKPSYGDLPMQDSDISFVSSGRPSIDRIFPTLYESQDMGGRATPPQISSSTDLDLTRSFESLQLGRMSVDMNFPSEFSSISQDSDRLSISSQSMEDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKAKSKAAVEAAEAARRIAELEAQKRMKAEMKALKEAEEKKKAYDALAQTDNIRYRKYTIEEIEAATEFFSESRRIGEGGYGPVYKCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLLRRGNTPPLSWHVRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERSIEKGMFDTILDPVITDWPIEEALSFAKLSLKCAELRRKDRPDLGKVILPELNRLRAIAEDTMHPTLMGDTSPSRSSSQVSLQLGAMASSPQSYNSSRNPSANF* 1343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2522498 2532341 + Chy4G070020.1 Chy04g00284 224183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00284 1342 Coils Coil 604 624 - -
Chy04g00284 1342 Coils Coil 918 938 - -
Chy04g00284 1342 SMART serkin_6 1027 1290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00284 1342 Gene3D Phosphorylase Kinase; domain 1 303 411 - -
Chy04g00284 1342 SUPERFAMILY Protein kinase-like (PK-like) 340 614 IPR011009 -
Chy04g00284 1342 SUPERFAMILY Protein kinase-like (PK-like) 1010 1285 IPR011009 -
Chy04g00284 1342 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 342 536 - -
Chy04g00284 1342 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 655 1339 - -
Chy04g00284 1342 Pfam Leucine rich repeat N-terminal domain 26 69 IPR013210 -
Chy04g00284 1342 Gene3D Transferase(Phosphotransferase) domain 1 1100 1305 - -
Chy04g00284 1342 Gene3D Transferase(Phosphotransferase) domain 1 412 633 - -
Chy04g00284 1342 PANTHER OS02G0152300 PROTEIN 342 536 - -
Chy04g00284 1342 ProSiteProfiles Protein kinase domain profile. 336 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00284 1342 Gene3D Phosphorylase Kinase; domain 1 1005 1099 - -
Chy04g00284 1342 Coils Coil 885 912 - -
Chy04g00284 1342 PANTHER OS02G0152300 PROTEIN 655 1339 - -
Chy04g00284 1342 MobiDBLite consensus disorder prediction 1305 1342 - -
Chy04g00284 1342 CDD STK_N 656 722 - -
Chy04g00284 1342 Pfam Protein kinase domain 340 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00284 1342 Pfam Protein kinase domain 1028 1281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00284 1342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1145 1157 IPR008271 GO:0004672|GO:0006468
Chy04g00284 1342 MobiDBLite consensus disorder prediction 1303 1342 - -
Chy04g00284 1342 ProSiteProfiles Protein kinase domain profile. 1027 1305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00284 1342 Gene3D Ribonuclease Inhibitor 24 258 IPR032675 -
Chy04g00284 1342 SUPERFAMILY L domain-like 27 214 - -
Chy04g00284 1342 Pfam Leucine rich repeat 122 181 IPR001611 GO:0005515
Chy04g00284 1342 Coils Coil 952 1004 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy11g01234 Chy-Chr11:18463723 Chy04g00284 Chy-Chr4:2522498 1.12E-19 dispersed
Chy01g00710 Chy-Chr1:5199310 Chy04g00284 Chy-Chr4:2522498 2.97E-20 transposed
Chy01g02190 Chy-Chr1:26459732 Chy04g00284 Chy-Chr4:2522498 2.07E-18 transposed
Chy02g02288 Chy-Chr2:26926467 Chy04g00284 Chy-Chr4:2522498 2.73E-17 transposed
Chy03g00674 Chy-Chr3:9312755 Chy04g00284 Chy-Chr4:2522498 3.57E-20 transposed
Chy03g01203 Chy-Chr3:15140357 Chy04g00284 Chy-Chr4:2522498 2.61E-22 transposed
Chy05g00834 Chy-Chr5:11953629 Chy04g00284 Chy-Chr4:2522498 3.10E-21 transposed
Chy05g01451 Chy-Chr5:18361498 Chy04g00284 Chy-Chr4:2522498 9.24E-19 transposed
Chy05g01482 Chy-Chr5:18581234 Chy04g00284 Chy-Chr4:2522498 1.13E-16 transposed
Chy07g00710 Chy-Chr7:7011152 Chy04g00284 Chy-Chr4:2522498 1.18E-19 transposed
Chy07g00849 Chy-Chr7:11055030 Chy04g00284 Chy-Chr4:2522498 2.00E-22 transposed
Chy09g00323 Chy-Chr9:2784576 Chy04g00284 Chy-Chr4:2522498 5.45E-14 transposed
Chy09g01031 Chy-Chr9:12833155 Chy04g00284 Chy-Chr4:2522498 1.48E-16 transposed
Chy03g01215 Chy-Chr3:15268240 Chy04g00284 Chy-Chr4:2522498 3.91E-16 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71167 PF00069 Pkinase 8.10E-39 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00284 - - csv:105435028 1200.65