Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00287 ATGGCACCGAGATTGGGATTTTTGTGTCGGTGGGGTAAAGAGAAAGACCCTCAAAAGGGAACTCCGGTGGTTGTAACAATGGAGAAACCTAACTTCTCCGTCGTGGAGATCGACGGTCCCGACGCTGCATTCCGGCCGGTGGAGAAGAGTAGAGGCAAAAATGCCAAACAGGTTACATGGGTTCTTCTTCTAAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTCTTACTGTTCTTTGGGCATTGTTGGGAACAATCAAGAAGAGGCTGATCTACAGACAAGGAGTCGCCATTGAAGGCGGGAAGTTATTGTTTCGAGTTATTAGAGTTTTCTTAGTAACTTCTATTGCCATTCTTATTTTTGAAATACTTGCTTATTTCAAAGGCTGGCATTATTTCCAGAATTCCAATCTCCATATTCCTCAAGCTTCTGAGTTGCAAGGATTCCTTCATTCACTCTATGTGGATTGGTTAACTTTTAGAGCAGACTACATTGCTCCCCTCATTCAAACACTGTCTAAATTTTGCATTGTTTTGTTCCTTATTCAATCAGTGGATCGTATGATCCTTTGTTTTGGTTGCCTGTGGATTAAGTACAAAAGAATTGAACCCAAGATTGAAGGGGATCCCTTTAAGTTGGATGACGTGGAAGGAGCTGGGTACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAGCGGGAGGTTTATGAGCAATCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGACCATTTACTAATTCAAGTTCTTGATGACTCTGATGATGAGAGCATCCAAATGTTAATTAAAGCAGAGGTTGCCAAATGGAGCCAAAAGGGGGTAAATATTGTGTATCGCCATCGATTAGTAAGAACAGGATATAAAGCAGGGAATCTCAAGTCTGCAATGAGTTGCGATTATGTTAGAGACTATGAGTTTGTAGCAATTTTTGATGCTGACTTTCAACCTAATCCAGATTTTCTTAAACTGACTGTCCCCCATTTCAAGGATAACCCGGAGCTTGGGTTAGTTCAGGCCAGATGGTCTTTTGTGAACACGGACGAAAACTTGTTGACACGCCTTCAAAATATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTTAATGGGGTGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAAGCTTTGGAGGAGTCTGGAGGATGGCTTGAAAGAACCACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTTGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCTGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTCTTCAGGTTGTGTCTTCCAGCAGTCATAAGTTCTAAGATATCAACATGGAAGAAGGCAAATTTGATACTGTTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTACTCCTTCACTTTGTTCTGCATAATTCTTCCTCTAACCATGTTCGTACCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTATGTCCCCATTTTCATGTCATTACTCAACATTCTTCCGTCCCCAAAATCTTTTCCTTTTATTGTCCCCTACCTTCTTTTTGAGAACACCATGTCCGTCACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACTAAAAAAGCCGGCAGGTCCTCCGAATCCGACTTACTGGCTGCTGCTGAAAGCGACTCTAAGACAATGAATCAAGCACAGATCTATAGAGGTGCTTCCGAGAGTGAGATTTCCGAGTTGGCTCACTTGAAGGAACGCAAAGAAGTAGTCTCTGCACCTGTCAAAAAAGTTAACACGATATATCGGAAAGAGCTAGCTCTCGCGTTTCTTTTACTCTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTCCACTTCTACTTCTTGATGTTCCAAGGTGTAACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2073 42.74 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNAKQVTWVLLLKANRAVGCITWLLTVLWALLGTIKKRLIYRQGVAIEGGKLLFRVIRVFLVTSIAILIFEILAYFKGWHYFQNSNLHIPQASELQGFLHSLYVDWLTFRADYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKYKRIEPKIEGDPFKLDDVEGAGYKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQMLIKAEVAKWSQKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNTDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAVISSKISTWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPIFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAESDSKTMNQAQIYRGASESEISELAHLKERKEVVSAPVKKVNTIYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS* 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2598661 2601467 + Chy4G070050.1 Chy04g00287 224186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00287 690 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 218 444 IPR029044 -
Chy04g00287 690 Pfam Glycosyl transferase family group 2 319 532 IPR001173 -
Chy04g00287 690 PANTHER - 13 690 - -
Chy04g00287 690 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 526 IPR029044 -
Chy04g00287 690 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 13 690 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01422 Chy-Chr1:19725249 Chy04g00287 Chy-Chr4:2598661 0 dispersed
Chy03g01617 Chy-Chr3:18105672 Chy04g00287 Chy-Chr4:2598661 0 dispersed
Chy04g00287 Chy-Chr4:2598661 Chy09g00318 Chy-Chr9:2726245 0 dispersed
Chy04g00287 Chy-Chr4:2598661 Chy07g00213 Chy-Chr7:1721438 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00287 - - csv:101217415 1328.15