Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00298 ATGAAGATCCAATTCTTTCTTTTTCTTCTTCTTCTTCTTCATTCAATTTGCTGTTTTGCTCAACTTCACCTCAATTTTTATCAAAACTCATGTCCAAATGTTGAGTCCATTGTTAGAGCTGCAGTGAAACAGAAATTTGAACAGACTTTTGTCACTGCCCCTGCCACTCTAAGGCTCTTCTTCCATGATTGTTTTGTTAGGGGTTGTGATGCTTCTGTGATGATCCAAACAAATAACCACACTTCTGAGAAAGATAATTCAGAGAATCTTTCGCTCGCCGGAGACGGTTTCGACACCGTGATCAAAGCTAAGGCTGCTGTGGATAGCGTGCCAGGATGTAAGAATAAGGTTTCTTGTGCTGACATTTTGGCTTTGGCTACTAGAGATGTTATAGCTTTGACGGGAGGACCGTCATATGCCGTGGAGTTAGGAAGACGAGACGGGCAAATCTCGACAAGAAAGAGTGTTCGACATCACCTTCCTAAGCCTGATTTTGGATTAAATCAGCTCAATGCTATGTTTGCAAAACATGGTCTAACTCAAACAGACATGATTGCTCTCTCAGGTGCACATACAATTGGATTCTCACATTGCAAGCACTTCTCCAAAAGGCTATACAGTTTCCAAAGCAAAAACAGAATTGACCCGACGTTTAATCCAACGTACGTCGACGAGCTCAAGAGGGAATGTCCGAGAAACGTTGATCAGAGAATTGCGATCGACATGGACTCAACGTCGTCGTTCACATTCGACAACATGTACTTTAAGAATCTGCAGATGGGAAAAGGATTGTTCACCTCAGACCAAGTGTTGTTCACAGATCCAAGATCAAGAAAAACAGTGAACTTATTTGCTTCCAACAATACAGCTTTTGAGCAAGCTTTTGTAGTTGCAATGACAAAGCTTGGGAGAGTTGGAGTCAAAACAAAAAACCAAGGAGAGATCAGAATTGATTGTTCATCAGTGAACTAA 972 41.46 MKIQFFLFLLLLLHSICCFAQLHLNFYQNSCPNVESIVRAAVKQKFEQTFVTAPATLRLFFHDCFVRGCDASVMIQTNNHTSEKDNSENLSLAGDGFDTVIKAKAAVDSVPGCKNKVSCADILALATRDVIALTGGPSYAVELGRRDGQISTRKSVRHHLPKPDFGLNQLNAMFAKHGLTQTDMIALSGAHTIGFSHCKHFSKRLYSFQSKNRIDPTFNPTYVDELKRECPRNVDQRIAIDMDSTSSFTFDNMYFKNLQMGKGLFTSDQVLFTDPRSRKTVNLFASNNTAFEQAFVVAMTKLGRVGVKTKNQGEIRIDCSSVN* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 2695692 2697005 + Chy4G070160.1 Chy04g00298 224197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00298 323 SUPERFAMILY Heme-dependent peroxidases 21 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 Pfam Peroxidase 38 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Chy04g00298 323 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Chy04g00298 323 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 Gene3D Peroxidase, domain 2 161 302 - -
Chy04g00298 323 PANTHER - 3 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 Gene3D - 25 323 - -
Chy04g00298 323 CDD secretory_peroxidase 21 322 IPR033905 GO:0004601|GO:0042744
Chy04g00298 323 PANTHER PEROXIDASE 3 323 - -
Chy04g00298 323 ProSiteProfiles Plant heme peroxidase family profile. 21 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy04g00298 323 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00105 Chy-Chr3:1034316 Chy04g00298 Chy-Chr4:2695692 5.37E-131 dispersed
Chy04g00298 Chy-Chr4:2695692 Chy11g00234 Chy-Chr11:2187809 3.39E-154 dispersed
Chy04g00298 Chy-Chr4:2695692 Chy09g00313 Chy-Chr9:2677518 7.86E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00298 K00430 - csv:101218982 636.336