Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00401 ATGCAAAGCATTTCTTTTTGTGTTTTTTTCGCTTTGGTTTGTGTTACCTTTTTTCTTATTTCTGAAAATGTAAAAGTAGCTGATGCTGCTGAAGACGCAAACAATGGTGTTTATGTCGTTTACATGGGATCCGCTTCTGGCTTCAGGACTGACTTCCTTCGCCTTCTTAACTCTGTCAACAGACGGAACGCAGTGGTACACACATATAAACATGGGTTCACAGGATTTGCAGCTCGCCTATCAGAACATGAAGCCCAAGCCATGAGACAAAGCCCTGGAGTTGTTTCGGTTTTTCCCGATCCATTATTGAAGTTACACACAACTCATTCATGGGATTTCTTGGTCGGTCAGACAAGCGTCAAAATCGACGCCAATCCGAAATTAGATCCCCCAGCTTCTTCCTCTCAACCATACGATACCATTGTAGGAATCTTGGACACTGGTATTTGGCCGGAATCGGAGAGTTTTAATGACATGGGTATGGGTCCAATACCTTCGAGATGGAAAGGTACCTGCATGGTAGGCGATGACTTCACTTCCTCCAACTGTAATAGAAAAATCATTGGAGCAAGATTTTACGAAAGTTCTGAGAGTGACGGCATACGGTACCACTCACCTCGAGACGGAGCTGGACATGGCACCCACGTGGCATCAACGGCGGCCGGAAGCGCCGTGGCTAATGCATCGTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTACAGAGTCTGCATGGCCGACGGCTGTCGTGGGTCGTCGATCCTGAAGGCGTTTGATGATTCCATCGCCGAAGGGGTCGATGTATTGTCCTTATCTCTCGGTACACCCTCCGTCTTCCAACCAGATTTGACGGCCGACCCTATTGCCATCGGAGCCTTTCATGCGGTTGAGAAGGGCATTACAGTTGTCTGCTCCGCCGGAAACGACGGTCCCAGTTCGGGAACGGTGGTGAACGACGCGCCGTGGATTCTAACAGTGGCTGCCTCCACCATAGATAGGGATTTTGAGTCTGATGTTGTGCTGGGCAACAAAAAAGTGATCAAGGGCGAAGGTATAAACTTCTCTGATCTTCAAAAGTCACCTGTATACCCACTAATAGAAGGCAAGTCAGCCAAGAAAGCGAGTGCCAGTGAAGACAGTGCAAGGATTTGTTCTGAAGATTCCATGGATGAAGCTCAAGTGAAGGGAAAGATAGTTATTTGCGAAAACAGTGTCGAAGGAGGCGGTTCGGATTGGCAAAGTCAGGCTGAAACAGTGAAGAATCTTGGAGGGGTTGGGGTAGTTTTGATTGATGACGACTCAAAATTAGTTGCAGAGAAGTTTTCTACTCCCATGACAGTTATTAGCAAAAAGGATGGTCTTGAGATCCTCTCCTATGTTAACTCAAGCAGGAAACCAGTTGCTACAATTCTCCCCACTGAGACCATAATAAACTATAAGCCAGCGCCTGCTATAACATATTTTTCATCCAGAGGGCCTAATCCCGCAGTATTAAACATAATCAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGCAATGATTCAAGCTCAACTCCACAAGCAACGAAGTCACCACTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCCCATGTCTCTGGCGTAGTGGCTTCTGTAAAATCTCAAAACCCCACATGGAGTCCCTCAGCAATCAGATCAGCCATCATGACAACAGCAATCCAAACGAATAACTTGGGATCACCGATGACTTTGGATACGGGATCAGTAGCCACACCTTATGATTATGGGGCAGGAGAAATATCAACCAATGGAGCACTACAACCAGGACTAGTCTATGAAACTAGTACCACAGACTACTTACTATACCTTTGCGGCCGAGGTTATAATCTAACCACCATTAAGAGCATCACAACCACTGTTCCTGATGGATTTGATTGCCCCAAGAATTCAAATGCAGACTACATATCCAACATGAACTATCCAACAATAGCAGTATCTGAATTGAAAGGCAAGGAAAGCAAGAAAGTAATCAGAACAGTTACAAATGTTGGTGGCAATGGTGAAACAGTTTACACAGTCAGTGTAGATGCACCTGAGGAAGTAGCGGTCAAAGTGATTCCAGAGAAATTGAAATTTGCAAAGAACTATGAGAAGCAGAGTTATCAAGTGGTTTTCACCCAAACTGTATCCACACTTGAGACAGGCTTTGGTTCAATCACTTGGACCAATGGAAAACATCGAGTCCGAAGTCCATTTGTCGTCACTAGTGAGAGTAGTGAGCCATAA 2316 46.33 MQSISFCVFFALVCVTFFLISENVKVADAAEDANNGVYVVYMGSASGFRTDFLRLLNSVNRRNAVVHTYKHGFTGFAARLSEHEAQAMRQSPGVVSVFPDPLLKLHTTHSWDFLVGQTSVKIDANPKLDPPASSSQPYDTIVGILDTGIWPESESFNDMGMGPIPSRWKGTCMVGDDFTSSNCNRKIIGARFYESSESDGIRYHSPRDGAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCRGSSILKAFDDSIAEGVDVLSLSLGTPSVFQPDLTADPIAIGAFHAVEKGITVVCSAGNDGPSSGTVVNDAPWILTVAASTIDRDFESDVVLGNKKVIKGEGINFSDLQKSPVYPLIEGKSAKKASASEDSARICSEDSMDEAQVKGKIVICENSVEGGGSDWQSQAETVKNLGGVGVVLIDDDSKLVAEKFSTPMTVISKKDGLEILSYVNSSRKPVATILPTETIINYKPAPAITYFSSRGPNPAVLNIIKPDISAPGVNILAAWLGNDSSSTPQATKSPLFNVISGTSMSCPHVSGVVASVKSQNPTWSPSAIRSAIMTTAIQTNNLGSPMTLDTGSVATPYDYGAGEISTNGALQPGLVYETSTTDYLLYLCGRGYNLTTIKSITTTVPDGFDCPKNSNADYISNMNYPTIAVSELKGKESKKVIRTVTNVGGNGETVYTVSVDAPEEVAVKVIPEKLKFAKNYEKQSYQVVFTQTVSTLETGFGSITWTNGKHRVRSPFVVTSESSEP* 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3564610 3569623 + Chy4G071190.1 Chy04g00401 224300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00401 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 106 IPR037045 -
Chy04g00401 771 SUPERFAMILY Subtilisin-like 137 620 IPR036852 GO:0004252|GO:0006508
Chy04g00401 771 ProSiteProfiles Serine proteases, subtilase domain profile. 110 616 - -
Chy04g00401 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Chy04g00401 771 Gene3D - 341 486 - -
Chy04g00401 771 CDD PA_subtilisin_like 347 479 - -
Chy04g00401 771 ProSitePatterns Serine proteases, subtilase family, histidine active site. 212 222 IPR022398 -
Chy04g00401 771 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Chy04g00401 771 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Chy04g00401 771 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Chy04g00401 771 Pfam Fibronectin type-III domain 667 764 IPR041469 -
Chy04g00401 771 Gene3D - 633 767 - -
Chy04g00401 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 766 IPR045051 -
Chy04g00401 771 Gene3D Peptidase S8/S53 domain 139 629 IPR036852 GO:0004252|GO:0006508
Chy04g00401 771 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.1 62 766 - -
Chy04g00401 771 Pfam Peptidase inhibitor I9 58 106 IPR010259 -
Chy04g00401 771 CDD Peptidases_S8_3 103 583 IPR034197 -
Chy04g00401 771 Pfam PA domain 393 465 IPR003137 -
Chy04g00401 771 Pfam Subtilase family 140 587 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy03g00859 Chy-Chr3:11818268 Chy04g00401 Chy-Chr4:3564610 0 dispersed
Chy04g00401 Chy-Chr4:3564610 Chy06g01925 Chy-Chr6:23171906 0 dispersed
Chy04g00401 Chy-Chr4:3564610 Chy01g02163 Chy-Chr1:26261165 5.56E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00401 K25898 - csv:101213415 1482.62