Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00422 ATGGCACTCTTAACAAATTCCTTCCAAGATCACAAGAAACCCCTCTCCAATAAACGCCGCAAAAAACATCCAAACCCAACTCCCCCGCCTTCCTCCGCCCAATCCTCATGGGACCATATCAAGAACCTCATCACCTGCAAACAGGTTGAGGTTTCTAGAGTTCAAGAGCCAGGGAAACGGTCTCCGGCCTACTCGAAGTTGGGATCTTCTTGTAGCTCTATATGTAGCTTTAGAGATGTGGTTCATGGCAATGCTAAAGTGGTCCATAGAGCCGATAACTCCCCGGAAAGCAGCTCCGTCGGACAGGAAACTAGGTTACTTACTAGGAAATCTGCAAACGGTTCTTCTTCTCGTTCTTTAACAGCGCCGACTCCGGCCAGAACTAAAAACGGTGGTTCGGGTTCTGCTTCGTACAATTCGTCGTCTTCTAGAGGAATACAATTACGAAAACTTTCTGGGTGTTATGAATGTCACACCATCGTCGATCCTAGCAGGCTTCCAATTCCAAGGAGTTCTATATGTCCATGTCCTCAGTGTGGAGAGGTTTTCCCCAAGATTGAAAGCTTAGAGCTTCATCAATTAGTTCGCCACGCTGTATCGGAATTGGGTCCTGAGGATTCTGGTCGAAACATCGTGGAGATTATTTTCAAATCAAGCTGGCTAAAAAAGGACCGTCCAATTTGCAAGATCGAACGTATATTAAAGGTCCACAATACCCAACGCACAATCCAACGGTTTGAGGATTGTCGTGACGCAGTGAAGACACGTGCACTTGGTAGCACCAGAAAAAACCCGCGATGTGCGGCCGACGGTAATGAGTTACTGCGCTTCCACTGCAGCGCCTTGTTCTGCGACCTTGGCTCACGTGGCTCAACCGGCTTGTGTGGCTCGATTCCCGCCTGCGGTGTCTGCACTGTCATCCGTCATGGATTCCAGTCTAAACCCGGTGGCCCCCCTGGCGTACGCACCACCGCAAGTAGTGGCAGGGCCCACGATTCCTTTGACTGCGGCGACGGACGACGACGGGCGATGTTGGTGTGCCGCGTCATCGCCGGCAGAGTCAAGCGGATCTCGGAGGATGCTGCCGCCACTGGGACGACGACAACAGCTACGGAAGAGGAGAATGTGGTGTCGGCAGCGGCGGCGGCTGCCTCATACGACTCTGTTTCACGGCACTCCGGGATGTACTCGAATCTGGAGGAGTTGGTTATTTTCAATCCAAAGGCTATCCTTCCTTGTTTCGTTGTGATCTACGAAGCGCTCCAAACCTAA 1272 51.42 MALLTNSFQDHKKPLSNKRRKKHPNPTPPPSSAQSSWDHIKNLITCKQVEVSRVQEPGKRSPAYSKLGSSCSSICSFRDVVHGNAKVVHRADNSPESSSVGQETRLLTRKSANGSSSRSLTAPTPARTKNGGSGSASYNSSSSRGIQLRKLSGCYECHTIVDPSRLPIPRSSICPCPQCGEVFPKIESLELHQLVRHAVSELGPEDSGRNIVEIIFKSSWLKKDRPICKIERILKVHNTQRTIQRFEDCRDAVKTRALGSTRKNPRCAADGNELLRFHCSALFCDLGSRGSTGLCGSIPACGVCTVIRHGFQSKPGGPPGVRTTASSGRAHDSFDCGDGRRRAMLVCRVIAGRVKRISEDAAATGTTTTATEEENVVSAAAAAASYDSVSRHSGMYSNLEELVIFNPKAILPCFVVIYEALQT* 424
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3738463 3740547 - Chy4G071400.1 Chy04g00422 224321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00422 423 MobiDBLite consensus disorder prediction 88 141 - -
Chy04g00422 423 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 27 422 - -
Chy04g00422 423 MobiDBLite consensus disorder prediction 91 141 - -
Chy04g00422 423 ProSitePatterns Zinc finger C2H2 type domain signature. 174 197 IPR013087 -
Chy04g00422 423 ProSiteProfiles Zinc finger C2H2 type domain profile. 174 202 IPR013087 -
Chy04g00422 423 MobiDBLite consensus disorder prediction 1 37 - -
Chy04g00422 423 SUPERFAMILY ADP-ribosylation 199 419 - -
Chy04g00422 423 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 27 422 - -
Chy04g00422 423 Gene3D - 193 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00422 Chy-Chr4:3738463 Chy09g00586 Chy-Chr9:6787367 2.38E-108 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17812 None None None None Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00422 - - csv:101222539 791.571