Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy04g00431 | ATGTCTATAAAACCCTCCGCCATTGCCATTGCAAAAACTCCCCAACTTCCAAACACATCCTCCAAATCTCAACTTCAACCTTCTCTTTTTACTCTTCCCCCCAATCGGAAAATGTCGGCCGGACTCGGAAAATGCAGCAAAATCCGTCACATTGTCAGGCTCCGTCAAATGCTCCGGCGGTGGCGCAACAAAGCTAGAATGTCAGCCAATCGCATCCCTTCCGACGTACCCGCCGGACACGTGGCTGTCTGCGTCGGAACAAGCTCTCGGCGGTTCGTCGTACGGGCCACTTACTTGAACCACCCGGTGTTCAAGAAGCTTCTGGTCCAAGCTGAAGAGGAGTATGGGTTCACCAATCAAGGTCCTTTGGCAATCCCTTGCGACGAGTCGGTTTTCGAAGAAGTTATCCGGTTCATCTCTAGATCCGAGTCTCCTAACTCGGGACGGTTCGTGAAATTGGACGACTTTCAAAGCTATTGTCATATCGGAATCAGAACTGGGCTGGATTTGTGGCCGGAATCTAGGCCTTTGCTTCATGGGTTGGCCGAAAAATCCATTTGCTCCGGAGAATGCTTATGGAGATGGCAAAAACTGGTGGAGGGATCAATTCACCATGTCGTCCCGAGCTCGAATCGGAGTCGGGGCGGAACCGAGAAGGAAGAAGAAAAACAACAGAAAGTGTTGCTAATTCGGCCAGAGGTCTATTTTCTGTAA | 714 | 50.42 | MSIKPSAIAIAKTPQLPNTSSKSQLQPSLFTLPPNRKMSAGLGKCSKIRHIVRLRQMLRRWRNKARMSANRIPSDVPAGHVAVCVGTSSRRFVVRATYLNHPVFKKLLVQAEEEYGFTNQGPLAIPCDESVFEEVIRFISRSESPNSGRFVKLDDFQSYCHIGIRTGLDLWPESRPLLHGLAEKSICSGECLWRWQKLVEGSIHHVVPSSNRSRGGTEKEEEKQQKVLLIRPEVYFL* | 238 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 3841782 | 3842808 | - | Chy4G071490.1 | Chy04g00431 | 224330 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy04g00431 | 237 | PANTHER | SMALL AUXIN-UP RNA-RELATED | 43 | 181 | - | - | |
| Chy04g00431 | 237 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 43 | 181 | IPR003676 | GO:0009733 | |
| Chy04g00431 | 237 | Pfam | Auxin responsive protein | 53 | 138 | IPR003676 | GO:0009733 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy01g00725 | Chy-Chr1:5277764 | Chy04g00431 | Chy-Chr4:3841782 | 5.99E-63 | dispersed | |
| Chy04g00431 | Chy-Chr4:3841782 | Chy11g00325 | Chy-Chr11:2886823 | 4.96E-51 | dispersed | |
| Chy04g00431 | Chy-Chr4:3841782 | Chy11g00324 | Chy-Chr11:2868413 | 6.78E-17 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy04g00431 | K14488 | - | csv:101216342 | 305.064 |