Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00433 ATGGGCTCCGTGGAAGAGAAGCTCAAGACATCAGGGGGTTTGATTAATAACGCCCCACAGACTAACCTTCTCGACGAGATGAAGTTGTTGAAAGAAATGCAAGATCAATCAGGGGCCCGGAAGGCTATAAACTCCGAGCTGTGGCATGCTTGTGCCGGTCCTCTTGTTTCCTTGCCCCATGTGGGTAGTCTTGTTTATTACTTTCCTCAGGGACATAGTGAACAGGTGGCAGTTTCTACCAAGAGAACAGCAACCTCACAGATTCCAAATTATCCTAATCTTCCCTCTCAGTTGATGTGCCAAGTTCAAAATGTTACCTTACACGCTGATAAAGATTCAGATGAAATCTATGCTCAAATGAGTCTTCAACCGGTGCTCTCTGAAAAAGATGTTTTTCTAGTTCCGGACTTCGGATTGAGGCCAAGTAAACACCCAAATGAGTTCTTCTGCAAAACTTTAACTGCCAGTGACACCAGCACACACGGTGGATTCTCAGTGCCACGCAGGGCTGCTGAAAAACTCTTTCCTCCATTGGATTACACAATGCAACCGCCAACTCAGGAGCTCATTGTCAGAGACCTGCATGACAATACCTGGACTTTTCGCCACATATATCGCGGGCAGCCGAAACGACACCTTCTCACAACTGGGTGGAGTCTATTCGTTGGAGCAAAGAGGCTTAGAGCAGGAGATTCTGTTCTTTTTATAAGGGATGAAAAGTCTCAGTTGCTTATTGGAGTGAGGCGTGCTAACCGGCAACAAACAACATTGCCATCATCGGTTCTATCTGCTGATAGTATGCATATTGGAGTTCTTGCTGCTGCGGCTCATGCTGCTGCCAATCGAAGTCCATTCACAATCTTCTACAACCCCAGAGCATGTCCTTCAGAATTTGTTATTCCTTTAGCCAAGTATCGCAAATGTGTATACGGTACTCAGCTTTCTGCAGGCATGAGGTTCGGGATGATGTTTGAAACAGAAGAATCCGGTAAACGTCGATATATGGGAACAATTGTTGGAATTAGCGATTTAGATCCACTTAGATGGCCAGGTTCCAAATGGCGAAATCTTCAGGTAGAGTGGGATGAGCCAGGATGCTGCGATAAGCAGAACAGGGTTAGTTCATGGGAAATAGAAACTCCAGAAAGTCTATTCATTTTTCCTTCTCTGACTTCGGGTCTTAAACGTCCATTACACGGTGGATTCTTGGGAGAAACTGATTGGGGAAGTCTGGTGAAGAGACCAATGCTTCGTGTTCCAGAAAATATACGTGGGGATCTTTCATATGCCCCAACATTATGCTCCGAACCACTGATGAAGATGCTACTGAGGCCTCAAATGGTTAACCTTAACGGAACCACCTTACAACAAGATTCAACTAACAATTTGGTCAAGATACAGGACATGAAGGACATGCAGAGTCCCAAAATGCAGCAGCTTATACCGACAGAAACTGCATCTCCCGGGAATCAAAATCAGCATCATCCAGGACCTGCACAATCTGATCCTATCAACCCAAATTCATCACCAAAAGCAAATGTACATGGAAAAGTGCACACCTCGGTGGCCATTGAAAGTGAAGCTCCAACTGCAGCTGATGGAGACAAGGCAAAATATGATCGTGACTTATCAGCCTCAACCAATCAATCCAATCCTTTGCCCCCCCCCGTTGGAGGTTGTGCAGAGGAAAAACTCACTGGTAACGAAGTGAATATGCAAACACTTGTAAACCAGCTTTCATTTGTGAACCAGAATCAGATTCCCATGCAGTTGCAATCCGTATCATGGCCGATGCAGCCTCAGCTTGAATCACTAATCCAACATCCACAACCAATCGACATGCCTCAGCCTGAGTATACGAATTCAAATGGTTTGATTTCATCTTTGGATGGCGATGGATGTTTGATTAACCCATCCTGTCTGCCTCTTCCTGGAGTAATGAGATCACCGGGAAATCTTTCCATGTTGGGATTGCAAGACTCCTCAACAGTCTTTCCTGAGGTTCTTAATTTTCCGTTACCTTCAACAGGCCAAGACATGTGGGACCCTCTTAATAATATAAGGTTCTCATCTCAAACCAATCATCTCGTCTCATTCTCTCATGCAGACGCATCTAACCTCAACTGTATGGCTAATGCAAATATTATGAGAGATGTTTCAGATGAAAGCAACAACCAAAGTGGGATATATAGTTGTTCTAACCTTGAAATGAGTAATGGTGGAAGTACTTTGGTTGATCATGCAGTTTCAAGTACCATTCTTGACGATTATTGCACATTGAAAGATGCTGACTTCCCACATCCTTCAGATTGCTTGGCTGGAAACTTCAGTTCGAGTCAAGATGTTCAGTCTCAGATTACCTCTGCTAGTTTAGGAGATTCTCAGGCTTTTTCCAGGCAAGAGTTTCATGATAATTCAGCTGGTACATCCTCATGCAATGTGGACTTTGATGAGGGCAGTCTTCTACAGAATGGTTCGTGGAAGCAAGTGGTACCGCCCTTGAGAACTTACACAAAGGTCCAGAAGGCAGGATCCGTTGGGAGATCTATTGATGTCACAAGTTTTAAGAACTACGACGAACTGTGCTCTGCTATTGAATGTATGTTTGGACTTGAAGGGTTGCTTAATGACCCAAGAGGCTCAGGATGGAAACTGGTATATGTGGATTATGAGAACGACGTCCTGCTTATTGGTGATGATCCCTGGGAGGAATTTGTTAGCTGTGTACGCTGCATCAGAATCTTGTCACCTTCAGAAGTTCAGCAAATGAGCGAAGAGGGAATGAAGCTTCTCAATAGTGCTATGATGCAAGGCATCAATTGCCCCATGTCGGAAGGTGGGCGATCTTAA 2850 44.56 MGSVEEKLKTSGGLINNAPQTNLLDEMKLLKEMQDQSGARKAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQVQNVTLHADKDSDEIYAQMSLQPVLSEKDVFLVPDFGLRPSKHPNEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSLTSGLKRPLHGGFLGETDWGSLVKRPMLRVPENIRGDLSYAPTLCSEPLMKMLLRPQMVNLNGTTLQQDSTNNLVKIQDMKDMQSPKMQQLIPTETASPGNQNQHHPGPAQSDPINPNSSPKANVHGKVHTSVAIESEAPTAADGDKAKYDRDLSASTNQSNPLPPPVGGCAEEKLTGNEVNMQTLVNQLSFVNQNQIPMQLQSVSWPMQPQLESLIQHPQPIDMPQPEYTNSNGLISSLDGDGCLINPSCLPLPGVMRSPGNLSMLGLQDSSTVFPEVLNFPLPSTGQDMWDPLNNIRFSSQTNHLVSFSHADASNLNCMANANIMRDVSDESNNQSGIYSCSNLEMSNGGSTLVDHAVSSTILDDYCTLKDADFPHPSDCLAGNFSSSQDVQSQITSASLGDSQAFSRQEFHDNSAGTSSCNVDFDEGSLLQNGSWKQVVPPLRTYTKVQKAGSVGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDYENDVLLIGDDPWEEFVSCVRCIRILSPSEVQQMSEEGMKLLNSAMMQGINCPMSEGGRS* 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 3874087 3878510 + Chy4G071510.1 Chy04g00433 224332

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00433 949 MobiDBLite consensus disorder prediction 482 515 - -
Chy04g00433 949 ProSiteProfiles PB1 domain profile. 835 919 IPR000270 GO:0005515
Chy04g00433 949 MobiDBLite consensus disorder prediction 482 560 - -
Chy04g00433 949 SMART B3_2 149 251 IPR003340 GO:0003677
Chy04g00433 949 CDD B3_DNA 148 249 IPR003340 GO:0003677
Chy04g00433 949 Gene3D - 147 250 IPR015300 -
Chy04g00433 949 ProSiteProfiles B3 DNA-binding domain profile. 149 251 IPR003340 GO:0003677
Chy04g00433 949 Pfam AUX/IAA family 879 922 IPR033389 -
Chy04g00433 949 Gene3D - 313 385 - -
Chy04g00433 949 Pfam Auxin response factor 275 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Chy04g00433 949 Pfam B3 DNA binding domain 149 250 IPR003340 GO:0003677
Chy04g00433 949 SUPERFAMILY DNA-binding pseudobarrel domain 136 278 IPR015300 -
Chy04g00433 949 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 939 IPR044835 GO:0003677|GO:0006355|GO:0009725
Chy04g00433 949 SUPERFAMILY CAD & PB1 domains 837 914 - -
Chy04g00433 949 Gene3D - 832 924 - -
Chy04g00433 949 PANTHER AUXIN RESPONSE FACTOR 5 30 939 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00433 K14486 K14486, ARF; auxin response factor - csv:101216825 1908.26
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00433 Chy-Chr4:3874087 Chy05g01480 Chy-Chr5:18553235 1.48E-37 dispersed
Chy04g00433 Chy-Chr4:3874087 Chy02g00116 Chy-Chr2:835963 6.96E-37 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1078 . Blo12g00892 . Bda03g00281 . Bpe04g00237 Bma04g00238 Bma01g02358 . . Cma01g01959 Cma09g00118 Car01g01531 . . Cpe06g00079 . . . . . . . . . . . . . . . . Cone7ag1874 . . Lsi04g01726 Csa03g04263 Chy04g00433 . . . . . . . . . . Cmo01g02017 Cmo09g00115 . . . Car09g00105 . Cpe02g00083 Bhi09g02107 . . . Hepe01g1631 Mch11g0134 . Cla05g01890 Cam05g2024 Cec05g2034 Cco05g2092 Clacu05g2015 Cmu05g1895 Cre05g2020 . . . Cme04g00486
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy10g01117 CCT,ECH 16 345 B3 DNA Binding Superfamily AT1G25560 63.0 5.1e-109 391.3
Chy09g00618 CCT,ECH 34 303 B3 DNA Binding Superfamily AT1G25560 63.2 8.1e-91 330.9
Chy04g01900 . 41 162 B3 DNA Binding Superfamily AT1G25560 64.8 2.5e-39 159.8
Chy09g01354 . 32 140 B3 DNA Binding Superfamily AT1G25560 66.1 5.2e-37 152.1
Chy11g01776 . 18 133 B3 DNA Binding Superfamily AT1G25560 62.1 6.8e-37 151.8
Chy09g01354 . 31 145 B3 DNA Binding Superfamily AT1G01030 83.6 2.1e-53 206.5
Chy11g01776 . 17 127 B3 DNA Binding Superfamily AT1G01030 80.2 1.4e-49 193.7
Chy10g01117 CCT,ECH 179 287 B3 DNA Binding Superfamily AT1G01030 67.0 9.7e-38 154.5
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy11g00424 . 44 388 B3 DNA Binding Superfamily AT3G18990 56.8 1.3e-94 343.6
Chy02g00116 . 23 383 B3 DNA Binding Superfamily AT1G59750 55.6 1.0e-107 387.9
Chy05g00847 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.7 1.3e-107 387.5
Chy12g00362 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.4 2.1e-105 380.2
Chy05g01480 CCT 23 358 B3 DNA Binding Superfamily AT1G59750 54.4 1.3e-102 370.9
Chy04g00433 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 3.0e-99 359.8
Chy11g00813 . 3 688 B3 DNA Binding Superfamily AT2G28350 58.3 2.9e-211 731.9
Chy03g00953 . 9 681 B3 DNA Binding Superfamily AT2G28350 50.1 2.3e-171 599.4
Chy08g00839 . 13 371 B3 DNA Binding Superfamily AT2G28350 65.8 4.8e-137 485.3
Chy01g01310 . 14 691 B3 DNA Binding Superfamily AT2G46530 54.9 5.7e-185 644.4
Chy07g01133 CCT,ECH 19 693 B3 DNA Binding Superfamily AT2G46530 53.7 1.6e-179 626.3
Chy02g00116 . 1 368 B3 DNA Binding Superfamily AT2G46530 51.6 6.9e-98 355.1
Chy12g00362 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.1 7.2e-95 345.1
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy01g01310 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.8 5.3e-174 607.8
Chy07g01133 CCT,ECH 55 683 B3 DNA Binding Superfamily AT3G61830 52.1 7.1e-163 570.9
Chy02g00116 . 51 364 B3 DNA Binding Superfamily AT3G61830 53.2 7.1e-86 315.1
Chy12g00362 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 4.3e-83 305.8
Chy05g01480 CCT 1 1103 B3 DNA Binding Superfamily AT1G19220 63.5 0.0e+00 1186.0
Chy02g02705 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.3e-104 378.3
Chy02g00267 . 46 378 B3 DNA Binding Superfamily AT1G19220 50.7 3.8e-91 333.6
Chy01g01310 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 4.6e-60 228.0
Chy07g01133 CCT,ECH 25 229 B3 DNA Binding Superfamily AT1G43950 56.3 3.0e-59 225.3
Chy02g02705 . 41 246 B3 DNA Binding Superfamily AT1G43950 52.9 4.7e-57 218.0
Chy02g00267 . 148 433 B3 DNA Binding Superfamily AT2G33860 65.5 1.1e-108 390.6
Chy11g01328 . 168 451 B3 DNA Binding Superfamily AT2G33860 58.0 1.0e-90 330.9
Chy02g02705 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 8.4e-77 284.6
Chy02g00116 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 6.9e-71 265.0
Chy12g00362 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-70 264.2
Chy05g00847 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 3.8e-69 259.2
Chy05g01480 CCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.4e-69 258.5
Chy07g01133 CCT,ECH 130 357 B3 DNA Binding Superfamily AT2G33860 52.4 1.9e-68 256.9
Chy04g00433 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 4.2e-68 255.8
Chy01g01310 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.8 3.9e-66 249.2
Chy11g01328 . 48 798 B3 DNA Binding Superfamily AT5G60450 60.1 2.2e-247 852.0
Chy05g01480 CCT 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 7.7e-99 358.6
Chy04g00433 . 20 940 B3 DNA Binding Superfamily AT1G19850 61.3 1.4e-290 995.7
Chy01g01310 . 20 351 B3 DNA Binding Superfamily AT1G19850 50.4 5.1e-94 342.8
Chy02g00116 . 1 910 B3 DNA Binding Superfamily AT1G30330 71.4 0.0e+00 1194.9
Chy12g00362 . 1 895 B3 DNA Binding Superfamily AT1G30330 71.7 0.0e+00 1165.2
Chy07g01133 CCT,ECH 25 379 B3 DNA Binding Superfamily AT1G30330 51.2 6.5e-100 362.5
Chy01g01310 . 20 352 B3 DNA Binding Superfamily AT1G30330 54.7 1.9e-99 360.9
Chy05g01480 CCT 1 1086 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1096.6
Chy02g00116 . 4 468 B3 DNA Binding Superfamily AT5G20730 59.5 4.5e-151 532.7
Chy12g00362 . 4 469 B3 DNA Binding Superfamily AT5G20730 59.1 4.5e-151 532.7
Chy02g02705 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.5 2.0e-103 374.4
Chy02g00116 . 97 872 B3 DNA Binding Superfamily AT5G37020 53.9 1.0e-201 700.3
Chy12g00362 . 97 858 B3 DNA Binding Superfamily AT5G37020 50.8 1.3e-188 656.8
Chy05g01480 CCT 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 2.8e-111 399.8
Chy05g00847 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.2 5.9e-109 392.1
Chy07g01133 CCT,ECH 1 696 B3 DNA Binding Superfamily AT4G23980 55.5 5.5e-199 691.0
Chy01g01310 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.1 4.3e-196 681.4
Chy04g00433 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.1 1.7e-96 350.5
Chy02g02705 . 36 834 B3 DNA Binding Superfamily AT5G62000 62.4 1.4e-287 985.7
Chy05g00847 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 8.4e-110 395.2
Chy05g01480 CCT 23 380 B3 DNA Binding Superfamily AT5G62000 54.0 7.3e-106 382.1
Chy05g01480 CCT 1 1103 B3 DNA Binding Superfamily AT1G19220 63.5 0.0e+00 1186.0
Chy02g02705 . 41 396 B3 DNA Binding Superfamily AT1G19220 52.5 1.3e-104 378.3
Chy02g00267 . 46 378 B3 DNA Binding Superfamily AT1G19220 50.7 3.8e-91 333.6
Chy04g00433 . 20 940 B3 DNA Binding Superfamily AT1G19850 61.3 1.4e-290 995.7
Chy01g01310 . 20 351 B3 DNA Binding Superfamily AT1G19850 50.4 5.1e-94 342.8
Chy02g00116 . 1 910 B3 DNA Binding Superfamily AT1G30330 71.4 0.0e+00 1194.9
Chy12g00362 . 1 895 B3 DNA Binding Superfamily AT1G30330 71.7 0.0e+00 1165.2
Chy07g01133 CCT,ECH 25 379 B3 DNA Binding Superfamily AT1G30330 51.2 6.5e-100 362.5
Chy01g01310 . 20 352 B3 DNA Binding Superfamily AT1G30330 54.7 1.9e-99 360.9
Chy05g01480 CCT 1 1086 B3 DNA Binding Superfamily AT5G20730 58.3 0.0e+00 1096.6
Chy02g00116 . 4 468 B3 DNA Binding Superfamily AT5G20730 59.5 4.5e-151 532.7
Chy12g00362 . 4 469 B3 DNA Binding Superfamily AT5G20730 59.1 4.5e-151 532.7
Chy02g02705 . 41 393 B3 DNA Binding Superfamily AT5G20730 52.5 2.0e-103 374.4
Chy02g00116 . 97 872 B3 DNA Binding Superfamily AT5G37020 53.9 1.0e-201 700.3
Chy12g00362 . 97 858 B3 DNA Binding Superfamily AT5G37020 50.8 1.3e-188 656.8
Chy05g01480 CCT 96 420 B3 DNA Binding Superfamily AT5G37020 62.4 2.8e-111 399.8
Chy05g00847 . 104 461 B3 DNA Binding Superfamily AT5G37020 59.2 5.9e-109 392.1
Chy02g00267 . 148 433 B3 DNA Binding Superfamily AT2G33860 65.5 1.1e-108 390.6
Chy11g01328 . 168 451 B3 DNA Binding Superfamily AT2G33860 58.0 1.0e-90 330.9
Chy02g02705 . 147 436 B3 DNA Binding Superfamily AT2G33860 51.0 8.4e-77 284.6
Chy02g00116 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 6.9e-71 265.0
Chy12g00362 . 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 1.2e-70 264.2
Chy05g00847 . 134 365 B3 DNA Binding Superfamily AT2G33860 54.7 3.8e-69 259.2
Chy05g01480 CCT 126 356 B3 DNA Binding Superfamily AT2G33860 54.5 6.4e-69 258.5
Chy07g01133 CCT,ECH 130 357 B3 DNA Binding Superfamily AT2G33860 52.4 1.9e-68 256.9
Chy04g00433 . 149 407 B3 DNA Binding Superfamily AT2G33860 53.5 4.2e-68 255.8
Chy01g01310 . 125 352 B3 DNA Binding Superfamily AT2G33860 52.8 3.9e-66 249.2
Chy11g01328 . 48 798 B3 DNA Binding Superfamily AT5G60450 60.1 2.2e-247 852.0
Chy05g01480 CCT 14 374 B3 DNA Binding Superfamily AT5G60450 50.1 7.7e-99 358.6
Chy02g00116 . 23 383 B3 DNA Binding Superfamily AT1G59750 55.6 1.0e-107 387.9
Chy05g00847 . 20 401 B3 DNA Binding Superfamily AT1G59750 51.7 1.3e-107 387.5
Chy12g00362 . 23 396 B3 DNA Binding Superfamily AT1G59750 53.4 2.1e-105 380.2
Chy05g01480 CCT 23 358 B3 DNA Binding Superfamily AT1G59750 54.4 1.3e-102 370.9
Chy04g00433 . 42 379 B3 DNA Binding Superfamily AT1G59750 52.2 3.0e-99 359.8
Chy02g02705 . 36 834 B3 DNA Binding Superfamily AT5G62000 62.4 1.4e-287 985.7
Chy05g00847 . 8 404 B3 DNA Binding Superfamily AT5G62000 51.2 8.4e-110 395.2
Chy05g01480 CCT 23 380 B3 DNA Binding Superfamily AT5G62000 54.0 7.3e-106 382.1
Chy01g01310 . 14 691 B3 DNA Binding Superfamily AT2G46530 54.9 5.7e-185 644.4
Chy07g01133 CCT,ECH 19 693 B3 DNA Binding Superfamily AT2G46530 53.7 1.6e-179 626.3
Chy02g00116 . 1 368 B3 DNA Binding Superfamily AT2G46530 51.6 6.9e-98 355.1
Chy12g00362 . 1 368 B3 DNA Binding Superfamily AT2G46530 50.1 7.2e-95 345.1
Chy01g01310 . 50 678 B3 DNA Binding Superfamily AT3G61830 54.8 5.3e-174 607.8
Chy07g01133 CCT,ECH 55 683 B3 DNA Binding Superfamily AT3G61830 52.1 7.1e-163 570.9
Chy02g00116 . 51 364 B3 DNA Binding Superfamily AT3G61830 53.2 7.1e-86 315.1
Chy12g00362 . 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 4.3e-83 305.8
Chy07g01133 CCT,ECH 1 696 B3 DNA Binding Superfamily AT4G23980 55.5 5.5e-199 691.0
Chy01g01310 . 17 676 B3 DNA Binding Superfamily AT4G23980 57.1 4.3e-196 681.4
Chy04g00433 . 46 379 B3 DNA Binding Superfamily AT4G23980 52.1 1.7e-96 350.5
Chy01g01310 . 20 224 B3 DNA Binding Superfamily AT1G43950 56.1 4.6e-60 228.0
Chy07g01133 CCT,ECH 25 229 B3 DNA Binding Superfamily AT1G43950 56.3 3.0e-59 225.3
Chy02g02705 . 41 246 B3 DNA Binding Superfamily AT1G43950 52.9 4.7e-57 218.0
Chy11g00813 . 3 688 B3 DNA Binding Superfamily AT2G28350 58.3 2.9e-211 731.9
Chy03g00953 . 9 681 B3 DNA Binding Superfamily AT2G28350 50.1 2.3e-171 599.4
Chy08g00839 . 13 371 B3 DNA Binding Superfamily AT2G28350 65.8 4.8e-137 485.3
Chy11g00813 . 4 688 B3 DNA Binding Superfamily AT4G30080 57.5 1.7e-211 732.6
Chy03g00953 . 1 684 B3 DNA Binding Superfamily AT4G30080 54.8 9.2e-197 683.7
Chy08g00839 . 14 371 B3 DNA Binding Superfamily AT4G30080 69.1 3.4e-143 505.8
Chy09g01354 . 31 145 B3 DNA Binding Superfamily AT1G01030 83.6 2.1e-53 206.5
Chy11g01776 . 17 127 B3 DNA Binding Superfamily AT1G01030 80.2 1.4e-49 193.7
Chy10g01117 CCT,ECH 179 287 B3 DNA Binding Superfamily AT1G01030 67.0 9.7e-38 154.5
Chy10g01117 CCT,ECH 16 345 B3 DNA Binding Superfamily AT1G25560 63.0 5.1e-109 391.3
Chy09g00618 CCT,ECH 34 303 B3 DNA Binding Superfamily AT1G25560 63.2 8.1e-91 330.9
Chy04g01900 . 41 162 B3 DNA Binding Superfamily AT1G25560 64.8 2.5e-39 159.8
Chy09g01354 . 32 140 B3 DNA Binding Superfamily AT1G25560 66.1 5.2e-37 152.1
Chy11g01776 . 18 133 B3 DNA Binding Superfamily AT1G25560 62.1 6.8e-37 151.8
Chy01g00047 . 21 242 B3 DNA Binding Superfamily AT3G19184 62.9 3.8e-67 251.9
Chy03g01525 . 38 259 B3 DNA Binding Superfamily AT3G19184 55.1 4.8e-54 208.4
Chy03g01523 . 4 227 B3 DNA Binding Superfamily AT3G19184 53.0 9.4e-50 194.1
Chy03g01525 . 83 260 B3 DNA Binding Superfamily AT5G42700 59.4 7.0e-54 207.2
Chy03g01523 . 51 224 B3 DNA Binding Superfamily AT5G42700 52.8 1.2e-45 179.9
Chy01g00047 . 82 237 B3 DNA Binding Superfamily AT5G42700 57.0 2.5e-43 172.2
Chy11g00424 . 44 388 B3 DNA Binding Superfamily AT3G18990 56.8 1.3e-94 343.6
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005032 1 3 2 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 1 3 1 1 41
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17813 PF02362 B3 1.10E-20 CL0405 Chy TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Chy04g00433 Chy_Chr04 FPKM 1.180088 1.649702 9.85225 10.30584 3.832276 3.645206 2.678717 12.100595 10.899787 11.68665