Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00454 ATGGCTGATCATGGAGGAGGCTCAGTTTCTGGGTCGTCAAGATTTTGGTGTTCAATTCCTGAGAAACTTCAACTCCATGGCGCCATGTTGGCCTTGCAATTCGGTTATGCTGGATTTCACGTTGTCTCAAGAGCTGCCCTTAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTATAGGAACATCATTGCCTTTTTCCTTCTCCTTCCCTTTGCCTATTTCCTCGAAAAGAAGGAACGTCCTCCCATTTCTTTCAATTTTCTTCTTCAGTTCTTCCTTCTTGCCCTTGTTGGAATCACGGCAAACCAAGGATTCTACTTGCTAGGTTTGGAGAACACGTCACCGACGTTTGCTTCAGCGATACAAAACTCAGTTCCAGCCATAACATTCCTTATGGCTGCATTACTCCGAATAGAACAAGTGAGACTAAACAGAAAAGATGGTATAGCAAAAGTGCTGGGAACAATATGCTGTGTAGCTGGGGCCACAGTGATCACTCTTTACAAAGGTCCAACAATATACAGCCCAACTCCTTCACTACAAATTGCACCCATCACCACCGCACCCATTTTCGCTTCACTTGGGGACGCATCCGGGAAAAGCTGGACCCTTGGCTGCGTCTTTTTGATCGGTCATTGTTTGTCTTGGTCTGGATGGCTTGTTTTGCAAGCACCCGTCTTGAAAAAATACCCAGCTCGTCTCTCTGTCACTTCTTACACTTGTTTCTTTGGGATAATCCAATTTGTCATCATCGCTGCCATTGCGGAGCGTGATGCTCAGGCTTGGCTCTTTCACTCTGGTGGTGAAATTTTCAGCGTCCTGTATGCGGGAGTGGTAGCGTCGGGAATTGCTTTTGCTGTACAGATATGGTGTATTCAAAGGGGTGGGCCGGTGTTCGTTGCGGTTTATCAACCAGTTCAGACATTGGTTGTCGCTGTCATGGCTTCCTTCGCCTTGGGTGAACAGTTCTTCTTGGGAGGGATCATTGGAGCGGTATTGATCATCGCCGGTTTATACTTCGTTCTTTGGGGAAAAAGCGAAGAGAGGAAATTTGCACTTGAGAAGGCTGCCATCCTCTCTGCTCCCGACCACAGTGGTAACAATAGAACACCTCCACACATCATCAAGCCCTCCTCCATTACTCAGCCACTTCTCATCCATTCTTCAAACGACAGCAACGTTTGA 1185 46.67 MADHGGGSVSGSSRFWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFFLLLPFAYFLEKKERPPISFNFLLQFFLLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVLGTICCVAGATVITLYKGPTIYSPTPSLQIAPITTAPIFASLGDASGKSWTLGCVFLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGIIQFVIIAAIAERDAQAWLFHSGGEIFSVLYAGVVASGIAFAVQIWCIQRGGPVFVAVYQPVQTLVVAVMASFALGEQFFLGGIIGAVLIIAGLYFVLWGKSEERKFALEKAAILSAPDHSGNNRTPPHIIKPSSITQPLLIHSSNDSNV* 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4141187 4144385 - Chy4G071720.1 Chy04g00454 224353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00454 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 59 169 - -
Chy04g00454 394 PANTHER WAT1-RELATED PROTEIN 16 364 - -
Chy04g00454 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 347 - -
Chy04g00454 394 PANTHER WAT1-RELATED PROTEIN 16 364 IPR030184 GO:0016021|GO:0022857
Chy04g00454 394 Pfam EamA-like transporter family 30 166 IPR000620 GO:0016020|GO:0016021
Chy04g00454 394 Pfam EamA-like transporter family 204 342 IPR000620 GO:0016020|GO:0016021
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01417 Chy04g00454 CCT
Chy03g01417 Chy04g00454 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02335 Chy-Chr2:27304367 Chy04g00454 Chy-Chr4:4141187 4.26E-136 dispersed
Chy04g00454 Chy-Chr4:4141187 Chy04g01678 Chy-Chr4:23148707 7.82E-81 dispersed
Chy03g01417 Chy-Chr3:16911876 Chy04g00454 Chy-Chr4:4141187 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00454 - - csv:101218486 753.821