Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00464 ATGGACAGAAAGTCCAGAACTAATAACAACGTTGCTCAAGCCAGCTCCCGCAAGGGCTGCATGAGAGGCAAAGGCGGACCAGATAACGCTGCTTGCACTTTCAAAGGCGTCCGCCAGCGTACTTGGGGCAAATGGGTCGCCGAAATTCGCGAACCCAACCGTGGTGCTCGTCTCTGGCTTGGCACCTTCGACACTGCCCATGAAGCCGCTCTTGCTTACGATGCTGCTGCTCGTAAACTCTACGGCTCCGAAGCTAAGCTTAATCTCCCCCAAACTACTACTACTCCTCATGAATTACCTCAATTGGAACATGGCGGCCAATCTCCTCCTAATAATAATATTATTGCTTCTCCCTCTCCAATCGCTACGACAACAACGATGTCCTCATCTCTGATTGAGCGGATTGGCGGGCTGTGGGAAAATGAGAACGTGAATTTTGATGAGTCAATATGGAGAGAGGCTGTGATGTCTTTGGATTTTCCTATTATCGAAGATGATCAAGGGATTTTCTTCGACGGGGCTGGAAGTTGGGACGCTTTGCAGTGGTGCAT 551 49.91 MDRKSRTNNNVAQASSRKGCMRGKGGPDNAACTFKGVRQRTWGKWVAEIREPNRGARLWLGTFDTAHEAALAYDAAARKLYGSEAKLNLPQTTTTPHELPQLEHGGQSPPNNNIIASPSPIATTTTMSSSLIERIGGLWENENVNFDESIWREAVMSLDFPIIEDDQGIFFDGAGSWDALQWCX 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 4323257 4323807 - Chy4G071820.1 Chy04g00464 224363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00464 184 Pfam AP2 domain 33 82 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Chy04g00464 184 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 110 180 - -
Chy04g00464 184 MobiDBLite consensus disorder prediction 1 25 - -
Chy04g00464 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 9 129 - -
Chy04g00464 184 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 9 129 - -
Chy04g00464 184 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 110 180 - -
Chy04g00464 184 CDD AP2 32 92 IPR001471 GO:0003700|GO:0006355
Chy04g00464 184 MobiDBLite consensus disorder prediction 87 120 - -
Chy04g00464 184 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy03g01419 Chy04g00464 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00464 Chy-Chr4:4323257 Chy08g00608 Chy-Chr8:13894298 4.34E-34 dispersed
Chy03g01419 Chy-Chr3:16921001 Chy04g00464 Chy-Chr4:4323257 9.59E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17816 PF00847 AP2 2.20E-15 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00464 - - csv:101204876 355.525