Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00528 ATGTCTATTCTTATTGTTTCTGTTCTTCTATTTCTCACAATCCTCATCTTCAAATTTCTCTACTCCAATTTCTGGGTTCCATGGAGAATTCAAATCTATTTCCAAAAGCAGGGTATAACAGGGCCTTCCTATCGTCCGATCATCGGTAATGCTACCGATATCCGTCGTTTGTACATAGAGGCGCAAACAAAACCGATCCCGTTTACCCATGATATAGTATGTCGGGTGCTGCCTTATATTCACCGATGGTCTGAGGAGTATGGAAAGATGTTTGTGTACTGGTTTGGACCAAAGCCGAGGCTGGCAATATCCGACCCAGATATGATTAAGGAAGTGCTTATGAATACTGGTGGACCTTTTAGAAAGGTTGGATTCACCCCGGTTTCCAAGTTGCTATTTGGTGAAGGACTCGTCGGACTTGAAGACGAACAATGGGTCGTTCACCGAAGAATAGCAAATCAAGCTTTCACTATGGATCGAGTCAAGGGATGGTTACCAGAAATTGCAACGAGTGTTTGTAGTGTGTTGGAGAAATGGGAAAAAATGAAAGGAGGAAATGAAAAGTTTGAATTAGACGTCCATAAACAACTTCGTAACCTCACAGCAGATGTAATTTCAAGAACTGCATTTGGAAGTAATTTTGAAGAAGGCAAACGCATTTTCAATTTGCAAGAACAACAAATGCATCATTTTCTTCGAGCTGTCTCATCTGTTTATATTCCAGGCTACAGATTTTTACCTACCAAGATGAATAGAGAAAGGGAGAGATTAGAAAAAGAAACTCGTGCCTCGATAAAAGCACTAGTCGAAAGTGAGGAAAACAGCAAAGAAAGGAAAAACTCAACTAATCTACTCAACCTATTGTTGTCATCATACAAGAGCCAGAAGGGAGAAATAGAAAAACTTAGAGTGGATGAAGTCGTAAACGAATGCAAGACATTTTATTTTGCAAGAATGGAAACAACAGCAAATCTTTTAACTTGGGCCCTTTTACTACTAGCAGAGCATCAAGAATGGCAAGATCGAGCTCGAGAAGAAGTTATCAATGTTTGTGGCCAAAAGGCGTCGCCTACAGCAGATAATTTAACCGAACTTAAACTAGTCGGAATGATAATCAATGAAACACTTCGACTTTATCCTCCAGCGGTGATGATGATGCGACGGACTATGAAACGATTAAGGCTAGGAAAAGTCGACGTTCCAGAAGACACACAACTTCAGCTTTCAGTGGTTGCAATCCACCATGATAAAGAGCTTTGGGGAGAAGATGCGAGTAGCTTCAACCCTATGAGATTTAGTAAGTCTAGGAAGCATCTGGCATCATTTCTGCCATTTGGGTTGGGTCCTAGAATATGTGTAGGGCAACATTTGGCTTTAATCGAGGCAAAAGTTGCATTGGCTATGATAATTCAACGATTCTCTTTTACTGTTTCTCCAACCTACACACATGCTCCCATGATGTTTGTAAGCTTAAACCCTCAATTTGGTGTTCAGCTCCTTGTTAGGAGCTTATGGAATTGA 1521 40.63 MSILIVSVLLFLTILIFKFLYSNFWVPWRIQIYFQKQGITGPSYRPIIGNATDIRRLYIEAQTKPIPFTHDIVCRVLPYIHRWSEEYGKMFVYWFGPKPRLAISDPDMIKEVLMNTGGPFRKVGFTPVSKLLFGEGLVGLEDEQWVVHRRIANQAFTMDRVKGWLPEIATSVCSVLEKWEKMKGGNEKFELDVHKQLRNLTADVISRTAFGSNFEEGKRIFNLQEQQMHHFLRAVSSVYIPGYRFLPTKMNRERERLEKETRASIKALVESEENSKERKNSTNLLNLLLSSYKSQKGEIEKLRVDEVVNECKTFYFARMETTANLLTWALLLLAEHQEWQDRAREEVINVCGQKASPTADNLTELKLVGMIINETLRLYPPAVMMMRRTMKRLRLGKVDVPEDTQLQLSVVAIHHDKELWGEDASSFNPMRFSKSRKHLASFLPFGLGPRICVGQHLALIEAKVALAMIIQRFSFTVSPTYTHAPMMFVSLNPQFGVQLLVRSLWN* 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5255009 5257754 + Chy4G072460.1 Chy04g00528 224427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00528 506 Coils Coil 254 274 - -
Chy04g00528 506 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PRINTS E-class P450 group I signature 108 129 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 PANTHER CYTOCHROME P450 FAMILY MEMBER 8 499 - -
Chy04g00528 506 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Chy04g00528 506 PANTHER CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 8 499 - -
Chy04g00528 506 Pfam Cytochrome P450 80 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00528 506 Gene3D Cytochrome P450 24 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00528 Chy-Chr4:5255009 Chy05g01336 Chy-Chr5:17483442 4.84E-145 dispersed
Chy04g00527 Chy-Chr4:5246948 Chy04g00528 Chy-Chr4:5255009 0 tandem
Chy04g00528 Chy-Chr4:5255009 Chy04g00529 Chy-Chr4:5281153 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00528 - - csv:101210785 884.789