Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00553 ATGAAGACATGGTTTGGAGATATAACTCTAAACACCATTTCTAGGATAGTGGTTGGAAAGCAATTCTCAACGGCCGTGGATGCGAGTAGTAATGAAAATGAAGAGTATCGGAAGGCGTTGAGGGATTTTTTCGAATGGTTTGGAGTATTTGTTCCTTCAGATTCGTTTCCATTTCTAAAGTGGTTGGATTTGGGTGGACATGAGAAAGCCATGAAGAAGACTGCCCAAGTTCTCGATGAGGTGTTTGATAAATGGATTCAAGAGCATCAACAAAAGAAAAATAATTTGGGTGCAGTGAAGATGGAAGAACATGTCTTCATGGATGTGATGCTTTCTAATGTTAGAGATGACGGACAACTTTCTAAATATGATTCTCATATTGTCACCAAAGCTACTTGTTTGGCTCTTATATTGGCTGGATCTGACACTACAACAGTAACAATGATATGGGCTCTTTCTTTACTTCTTAATAATCAAGAAGTACTTAAGAGAGCTCAACTTGAATTGGACGAACATGTTGGGAGACAAAGACAAGTGAAAGAATCCGATGTGAAGAACTTACTGTATCTTGAAGCTGTTGTGAAAGAAACATTACGTTTATATCCTGCAGCGCCAATTCTAATCCCTCATGAATCAGTTGAGGATTGTGTGGTTGCTGGTTACCATATTCCGTTAGGAACACGATTGATAGTGAATGTTCAAAAGCTTCAAAGAGATCCACAAATATGGGAGGATCCTTGTGAGTTTCGTCCAGAAAGATTTTTAACAAGTGAAAAAGATTTTGATGTTAGAGGACAGAGTCCCCAGTTAATACCATTTGGAAGTGGTCGAAGAATGTGCCCTGGAATCTCGTTTGCTCTACAAGTGATGCATTTAGCACTTGCCAATTTGCTTCATGGGTTTGAAATTAGTAGGCCAACTAAAGAGCTTCTGGACATGGAGGAGAGTGCTGGAATGACAAGTATTAGAAAGAATCCACGTGAAGTTGTTTTAACTCCACGCCTTCCACCTCAAGTTTATGAATTATAA 1029 39.07 MKTWFGDITLNTISRIVVGKQFSTAVDASSNENEEYRKALRDFFEWFGVFVPSDSFPFLKWLDLGGHEKAMKKTAQVLDEVFDKWIQEHQQKKNNLGAVKMEEHVFMDVMLSNVRDDGQLSKYDSHIVTKATCLALILAGSDTTTVTMIWALSLLLNNQEVLKRAQLELDEHVGRQRQVKESDVKNLLYLEAVVKETLRLYPAAPILIPHESVEDCVVAGYHIPLGTRLIVNVQKLQRDPQIWEDPCEFRPERFLTSEKDFDVRGQSPQLIPFGSGRRMCPGISFALQVMHLALANLLHGFEISRPTKELLDMEESAGMTSIRKNPREVVLTPRLPPQVYEL* 343
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5677724 5678832 - Chy4G072710.1 Chy04g00553 224452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00553 342 PRINTS E-class P450 group I signature 148 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 270 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 8 26 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 280 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 128 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS E-class P450 group I signature 232 256 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS P450 superfamily signature 280 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS P450 superfamily signature 139 156 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS P450 superfamily signature 271 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PRINTS P450 superfamily signature 192 203 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 PANTHER CYTOCHROME P450 82C3-RELATED 1 341 - -
Chy04g00553 342 PANTHER CYTOCHROME P450 1 341 - -
Chy04g00553 342 Pfam Cytochrome P450 1 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 Gene3D Cytochrome P450 1 331 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Chy04g00553 342 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 273 282 IPR017972 GO:0005506|GO:0016705
Chy04g00553 342 SUPERFAMILY Cytochrome P450 2 334 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00553 Chy-Chr4:5677724 Chy11g00648 Chy-Chr11:7794333 3.04E-173 dispersed
Chy04g00552 Chy-Chr4:5660245 Chy04g00553 Chy-Chr4:5677724 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00553 - - csv:101208335 671.389