Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00597 ATGATGTTATCTGCATCGCCATCGACGATAGCTCGAAGCTCACTGGAGGAAATGCTTGATTCTCTTCGACGAAGGGATGAGATTGAGAGGCCTAAAGACTTGCCGCCTGCATTGCCGTCTCGGCCCACTTCGAAGGCTCGGATTCCGCCGGTGAGGCGGGCTTTACCCGTCAATTTCAGGGTTAATGATGACGGTTCCTCAGAGTGCTCTATTAACGTCTTTAATGGAAAGGAGGATGCAATAAGGAAGGAGAATGGTTTGGGTAACTTTGCATTCAGGAGAACAAATAGAGATCAAGATGATGAATCGCCTTACATGGTAGCTTCAGAAAATGATAATATAGATCAAGTGAATGTTGCTTCTGCTTTACTTTCACATATTCAAAGCTCCAACTGGGAGGACAATATCAGTTATTTTCTTCAGAAGAAACTACGGGTTTGGTGTCAACTCCCAACTGGACAATGGGAGTTAGGAACTATACAGTCAAACAGTGGGATGGAGGCATGTATCATGCTCTCAAACAAAAAGGTTGTTAAAGTTTCAACAGTAGATCTTTTACCTGCTAATCCAGATATAGTGGAGGGGGTTGATGATCTTGTACAGCTCGGTTATTTGAACGAGCCTTCGGTTATTCACAGTCTCCAGCGAAGATTTTCTCAGGATAAAATTTATAGTAATGCAGGGTCAGTTTTGATTGCAATCAATCCGGTGAAAGACACTAAACAGTATGGAAATGAATTAATTACAGCCTATAGACAAAGAGTTATGAACAACCCTCATGTTTATGCTATAGCTGATTCTGCCTATTCTGCGATGATGCAAGATGAAGTTAATCAATCTATTATCATCAGTGGAGAAAGTGGAGCTGGCAAAACTGAGACAGCAAAAGTTGCCGTTCAATACCTGACTGCTCTTGGAGGTGGCAACGGCATAGATGATAGAATCCCACAGGCAAATGTTATACTGGAAGCGTTTGGGAATGCTAAAACCTCCAGAAACAACAATGCCAGCAGATTTGGGAAGTTGATTGAAATTCTTTTTAGCAGAACAGGGAAGATATGTGGTGCTGTAATCCAGACATTTCTGTTGGAAAAGTCAAGAGTTGTTCAGCTCGTCAATGGTGAGAGATCATTTCATGTCTTTTATCAACTTTGTGCTGGAGCACCATCTACACTTAAAGAGAAATTGAATATCAGAGTGCCCAGTGAGTACAGTTACCTTAATCAGAGTGAATGTCTGGTGATTGGTGATGTGGATGATGGACGGAAATTTCATACTCTTGTGGAAGCCCTAGATATACTTAAATTTACAAAAGAAGATCAAGAGCATGCATTTGGTTTGCTTGCTGCGGTTTTGTGGATAGGAAACATTACGTTTCAAACAATTGATAGTGAAAATCATGTGGAGGTCATGGCTAATGAAGCGGTTGCAAATGCTGCCAAGCTGATGGGTTGCAGTCCTAATGAGCTTAAGTTAGTTTTGTCGACCCACAAAGTGCAATCAGGCAACGATAGTATTGCTAAAAAAATGACTTTACGACAGGCAACCGATGCCAGAGATGCTTTGGCAAAATTTATCTATGCAAGCTTGTTTGACTGGGTTGTAGAACAGATCAACAAGTCACTTAAACCAAGAACGGAGCATTCTGGAAGATCCATAAATATCCTCGACTTCTATGGGTTTGAGTCATTTAAGAAGAATGGCTTCGAACAATTTTGTATCAATTATGCAAATGAGAGACTGCAGCAGCATTTTATTAGGCACATCTTCAAACTTCAGCAAGAGGACTACGAATTGAATGGTGTTGATGGCACAAAAGTCAACTTTGAAGACAATCTAGAGTGTTTGAATCTTATTGAGAAGAAACCTCTTGGAGTTCTAGCTTTGTTGGACGAAGAGTTAAATTTTACCAAAGCTACTGATCTGACATTTGCTAATAAACTAAAGCAACACTTTAAATCTCAACCTCACTTCAAAGGGGAAAGAGGCAGGGCTTTTGGTGTTCGCCATTATGCTGGAGAGGTTGTATACGATACAAATGGGTTTTTGGAGAAAAATAGAGATCTGCTGCATTCAGATGCCATCCAACTCTTTTCATCATGTACTTGCAAGCTACTGCAATTACTTGCCTCAAAAATGATTAACCAGTCCCACAAACCAACAGTTTCAATGTGCTCTACAAAAATAGTAGAATCCCCTGAGCCAGGTGTTGGAACCAAGTACAAGGTTCTACTATTTGACCTATTTCATAAATTGGAGAGCACCAACCATCATTTCATTTGTTGCATAAGGCCGAACAGAAATCAAGTTGGTGGCTTATTCGAGGAGGACCTTGTCTTACAACAGCTTAGATACTTTGGAATTTTGGAGGTTCTCAGAATTTCAAGATCTGGATATCCTACCAGGATGACGCATCAAGAATTTGCTGGAAGGTATGGATTCCTCCTTAAAGAAACCAGTGTATCTCGAGATTCATTGAGTATATCAATTGCTGTTCTGCAACAATTTAATGTCCACCCCGAGATGTACCGTGTTGGCTATATCAAACTATTTTTCCGTACAGGGCAGATTAGGGCATTGGATGAAAGGAAGAAGCAAGTTATGCAAGGCATCTTAGGAATACAAAAGTACATTCGTGGTTGCCATGCCCGTGGAAACTTCCATGATCTTAAGCAAGGGGCCACTACCTTACAATCATTTATTCGTGGTGAAAATGCCAGAAGGAGATGTACCGTGAAGAGGTTCTCATTTGTTGTGTATGCCTTCAGCGTTCCTAAGAAGGTCTATGAAGTTCAGGCAATCATACGATTACAATCTGTAATACGTGGTTCGTTGGCTCGAAAGCATTTAAGCATGCGTGATTCAAAGAAGTTGATTGAAAACAAAAAATCTAAATTGAACAAAGGCAGAAGGGTTTCAGAGGAAAAGTTTCAAGAACGGGCTCAATCCCTACCAACAAGTCTGACTGAGCTTCAAAAGAGGGTCGTGGAGGCAGAAGCAACCATAGAGAAAAAGGAAGGGGAAAATGCCGCACTGCGGGAGCAAGTAAAACAATTCGAGTCTAGGCGGCTAGAATATGAAGCTAAGATGAAATCCATGGAGGATATGTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAAGAAGACACTTGCTGCTGAAAATGCAGTCCCACCTGGAAGAGTTGATGCTGGTAACTCACCACCTCACTATTACGATTCTGAGGACATGACGTCCATGGGATCTCGAACTCCTGGTGGTACAACACCTACGAAAGCTTCTGGAATCTCTGAAGGGGGAGCAGGCCGAGAAATGAATGGTACTGTAGTTGCAGTGAACAATCTTATAAAGGAATTTGAACAGCGTAAAACTGCATTTGACGATGATGCCAAAGCTTTAATTGAAGCAAAATCAGGTCAGGCACAAACAGGTTCTGATGCAAATCCAGATGAAGAATACCGTAAAATTAAAGCCCGATTTGAAGCATGGAAAAAAGAGTACAAGGCTAGATTACGGGAAACAAAAGCTAAGGTTCATCATAAACATGGTCATTTCGAAGTTGATAGACTTCGTCGAAAATGGTGGGGAAAGTTCAGCTCAAAAGCATCATAA 3624 41.23 MMLSASPSTIARSSLEEMLDSLRRRDEIERPKDLPPALPSRPTSKARIPPVRRALPVNFRVNDDGSSECSINVFNGKEDAIRKENGLGNFAFRRTNRDQDDESPYMVASENDNIDQVNVASALLSHIQSSNWEDNISYFLQKKLRVWCQLPTGQWELGTIQSNSGMEACIMLSNKKVVKVSTVDLLPANPDIVEGVDDLVQLGYLNEPSVIHSLQRRFSQDKIYSNAGSVLIAINPVKDTKQYGNELITAYRQRVMNNPHVYAIADSAYSAMMQDEVNQSIIISGESGAGKTETAKVAVQYLTALGGGNGIDDRIPQANVILEAFGNAKTSRNNNASRFGKLIEILFSRTGKICGAVIQTFLLEKSRVVQLVNGERSFHVFYQLCAGAPSTLKEKLNIRVPSEYSYLNQSECLVIGDVDDGRKFHTLVEALDILKFTKEDQEHAFGLLAAVLWIGNITFQTIDSENHVEVMANEAVANAAKLMGCSPNELKLVLSTHKVQSGNDSIAKKMTLRQATDARDALAKFIYASLFDWVVEQINKSLKPRTEHSGRSINILDFYGFESFKKNGFEQFCINYANERLQQHFIRHIFKLQQEDYELNGVDGTKVNFEDNLECLNLIEKKPLGVLALLDEELNFTKATDLTFANKLKQHFKSQPHFKGERGRAFGVRHYAGEVVYDTNGFLEKNRDLLHSDAIQLFSSCTCKLLQLLASKMINQSHKPTVSMCSTKIVESPEPGVGTKYKVLLFDLFHKLESTNHHFICCIRPNRNQVGGLFEEDLVLQQLRYFGILEVLRISRSGYPTRMTHQEFAGRYGFLLKETSVSRDSLSISIAVLQQFNVHPEMYRVGYIKLFFRTGQIRALDERKKQVMQGILGIQKYIRGCHARGNFHDLKQGATTLQSFIRGENARRRCTVKRFSFVVYAFSVPKKVYEVQAIIRLQSVIRGSLARKHLSMRDSKKLIENKKSKLNKGRRVSEEKFQERAQSLPTSLTELQKRVVEAEATIEKKEGENAALREQVKQFESRRLEYEAKMKSMEDMWQKQMASLQMSLAAAKKTLAAENAVPPGRVDAGNSPPHYYDSEDMTSMGSRTPGGTTPTKASGISEGGAGREMNGTVVAVNNLIKEFEQRKTAFDDDAKALIEAKSGQAQTGSDANPDEEYRKIKARFEAWKKEYKARLRETKAKVHHKHGHFEVDRLRRKWWGKFSSKAS* 1208
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6590487 6600459 + Chy4G073150.1 Chy04g00597 224496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00597 1207 PANTHER MYOSIN 42 1205 - -
Chy04g00597 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 917 IPR027417 -
Chy04g00597 1207 Pfam Myosin head (motor domain) 196 853 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 Pfam IQ calmodulin-binding motif 893 910 IPR000048 GO:0005515
Chy04g00597 1207 Pfam IQ calmodulin-binding motif 932 950 IPR000048 GO:0005515
Chy04g00597 1207 Coils Coil 988 1036 - -
Chy04g00597 1207 MobiDBLite consensus disorder prediction 1081 1099 - -
Chy04g00597 1207 SMART iq_5 866 888 IPR000048 GO:0005515
Chy04g00597 1207 SMART iq_5 889 911 IPR000048 GO:0005515
Chy04g00597 1207 SMART iq_5 929 951 IPR000048 GO:0005515
Chy04g00597 1207 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 141 190 IPR004009 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 MobiDBLite consensus disorder prediction 1060 1106 - -
Chy04g00597 1207 Gene3D - 564 755 - -
Chy04g00597 1207 PRINTS Myosin heavy chain signature 320 347 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 PRINTS Myosin heavy chain signature 552 580 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 PRINTS Myosin heavy chain signature 605 633 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 PRINTS Myosin heavy chain signature 278 303 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 PRINTS Myosin heavy chain signature 224 243 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 Gene3D Kinesin motor domain 193 798 IPR036961 -
Chy04g00597 1207 Gene3D Myosin VI head, motor domain, U50 subdomain 433 541 - -
Chy04g00597 1207 ProSiteProfiles Myosin motor domain profile. 194 865 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 SMART MYSc_2a 188 866 IPR001609 GO:0003774|GO:0005524|GO:0016459
Chy04g00597 1207 Gene3D - 871 916 - -
Chy04g00597 1207 CDD MYSc_Myo8 208 853 IPR036022 -
Chy04g00597 1207 Gene3D - 376 432 - -
Chy04g00597 1207 ProSiteProfiles IQ motif profile. 930 957 IPR000048 GO:0005515
Chy04g00597 1207 Gene3D - 799 866 - -
Chy04g00597 1207 MobiDBLite consensus disorder prediction 24 49 - -
Chy04g00597 1207 PANTHER MYOSIN-2 ISOFORM X1 42 1205 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00597 Chy-Chr4:6590487 Chy10g00655 Chy-Chr10:13051188 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00597 K10357 - csv:101210624 2316.58