Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g00613 | ATGTTTTTATTTTCATCTTTCAATATCTATGTGGCTAATGATTTCTTAACATCTTCTCAAAACCTCAGTGATGGCAACACCTTGGTCTCTGGAAAAGGAATTTTCGAGCTGGGTTTCTTTCGTCCAGGAATCTCTAAGAACCGTTACTTGGGAATCTGGTACAAAACCATCCCAATCCCTACTGTTGTTTGGGTTGCCAACAGAGAAACTCCACTCATAGATTTTTCCAGTATATTAAGAATAAACACCACAGCGAATCGTGTTGTTCTCATCCAAAACGAAACTGTTATTTGGTCAGCAAAATCGTTGAAACCAATGGAAAATCCAAGGCTACAGCTTTTAGACACTGGAAATTTAGCCCTGAAAGATGGAAAGTCAGAGGAGATTTTGTGGCAAAGCTTTGATTATCCAACTGATACATTGTTGCCAGGAATGAAGCTGGGATGGGATTATGAAAATGGCATAAACAGACGATTATCAGCTTGGAAAAACTGGGACGACCCATCTCCTGGAACATTGATATTGGAAATGGAAAATCATAGCTATCCAGAACTCGCCATGTGGAATGGTACACAAGAAATCGTGAGAACTGGACCTTGGAATGGGATGCGGTTCAGCTCCAAATCCATTTCTGGTCTCCCAATTTTAGAGTACCATTATGGGAACAATAAAAATGAGCTTTATTTCAGCTTCCAGCTCATAAACAATTCTCTGATTGGTAGAATGGTATTGAACCAATCCAGGTCCAGGAGAGAGGCCTTACTGTGGTCAGAAGCTGAGAAAAACTGGATGATATATGCCACGATTCCAAGAGATTACTGCGACACATACAACGTTTGTGGTGCTTATGGGAATTGTGACATTGAAAATATGCCTGCTTGTCAATGTCTGAAAGGGTTTCAGCCAAGGGTGCTAGAGAATTGGAATCAAATGGATTATACAGAAGGGTGTGTCAGAACTAAGCATCTGAATTGCTGGGATGAAGTTGGGTTTGCAAAGTTACTAGGGATGAAATTGCCTGACACTACATATTCATGGGTTAATGAAAGCATGAGTTTAAGTGAATGCAGGGAAAAATGTTTGAGGAATTGTTCTTGTATGGCATTCGCAAATACAGATATTAGAGGATTAGGTAGTGGGTGTGCCATTTGGTTAAATGATCTTCTTGATATTAAAGTTGTTATCAAAGGTGGCCAAGACTTGTATGTTCGAATGCTTGCTTCTGAGTTAGGTATGTTTCTTATTCTCTGCCATAATTTTCATGCCATATCCTCTCTGACTCTGTTTCAAGTGCTTAATGAAGACACAACGAAGGCGAATTTGGTTATCATTGGCGTTATTGTTTCTGCTACGCTCCTTATAATTGCTGCCCTGGTTTTTGTTGGATTTTACATTATCAAAAGAAGGAAAATCCTTGAAGTTGAGAAACTTGATGTACAAGAGGAAGACTTGGAGCTCCCGTTATTTGACCTGTCAACAGTATCAAATGCTACTGACAATTTTTCAAACTCCAAAAAACTTGGAGAAGGTGGCTTTGGTGCAGTATTCTGGGGTAAACTGAAAGATGGACAAGAAATTGCTGTGAAAAGGCTTTCTAACTATTCAAGACAAGGAACTAATGAATTCAAGAATGAAGTAAAACTTATAGCCAAACTTCAGCATAGGAATCTTGTAAAGCTTCTGGGTTGCTGCATCCAAGAGAGAGAAAAAATGTTGATTTATGAATACATGCCTAATAAGAGCTTGAACTCTTTAATATTTGATCCTAATGGAAGGAAACTCTTAGATTGGTCAAAGCGATTCAATATCATATGTGGAATAGTTAGAGGGATTCTTTACCTTCATGAAGATTCTAGGTTGAGGATTATTCATAGAGATCTCAAACCAAGCAATATCTTGCTTGATATTGACATGAACCCCAAAATCTCAGATTTTGGAATGGCTAGAACTTTTGGTGAAGATCAAACCGAAGGAAATACTAGGAGAGTCGTTGGAACATATGGCTATATGGCACCAGAATATGCTATAGATGGACAATTTTCAATAAAATCAGATGTATTCAGTTTTGGCATACTACTATTAGAAATTATAAGTGGACAGAAGAATCAAGGATTTTATCGTCCAAACCAAACTTTCAATCTCATCGGACATGCATGGAAGTTATGGAATGAAGGAAGACCATTGGAATTGATTGACCCCTCAATTGGAGAGTCATATACTCTATCTGAAGTATTGAGATGCATCCATGTTAGTCTTTTATGCTTGCAACAACAGCCAGAAGATAGACCAATCATATCAGATGTGATTTCAATGCTAAATTGTGAGAGTACCTCCAAGTTGATGCAACCAAAACAACCAATATATTGCATGGACATGGATTCACTTAAAGAGGATTCTATTTCAAGCAAGAATGAAGCTTCTAGTTCTACCACCAACGAATTAACTGTTACTGTTGTAGAGGCTAGGTAG | 2469 | 38.19 | MFLFSSFNIYVANDFLTSSQNLSDGNTLVSGKGIFELGFFRPGISKNRYLGIWYKTIPIPTVVWVANRETPLIDFSSILRINTTANRVVLIQNETVIWSAKSLKPMENPRLQLLDTGNLALKDGKSEEILWQSFDYPTDTLLPGMKLGWDYENGINRRLSAWKNWDDPSPGTLILEMENHSYPELAMWNGTQEIVRTGPWNGMRFSSKSISGLPILEYHYGNNKNELYFSFQLINNSLIGRMVLNQSRSRREALLWSEAEKNWMIYATIPRDYCDTYNVCGAYGNCDIENMPACQCLKGFQPRVLENWNQMDYTEGCVRTKHLNCWDEVGFAKLLGMKLPDTTYSWVNESMSLSECREKCLRNCSCMAFANTDIRGLGSGCAIWLNDLLDIKVVIKGGQDLYVRMLASELGMFLILCHNFHAISSLTLFQVLNEDTTKANLVIIGVIVSATLLIIAALVFVGFYIIKRRKILEVEKLDVQEEDLELPLFDLSTVSNATDNFSNSKKLGEGGFGAVFWGKLKDGQEIAVKRLSNYSRQGTNEFKNEVKLIAKLQHRNLVKLLGCCIQEREKMLIYEYMPNKSLNSLIFDPNGRKLLDWSKRFNIICGIVRGILYLHEDSRLRIIHRDLKPSNILLDIDMNPKISDFGMARTFGEDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGQKNQGFYRPNQTFNLIGHAWKLWNEGRPLELIDPSIGESYTLSEVLRCIHVSLLCLQQQPEDRPIISDVISMLNCESTSKLMQPKQPIYCMDMDSLKEDSISSKNEASSSTTNELTVTVVEAR* | 823 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 6919317 | 6922303 | + | Chy4G073310.1 | Chy04g00613 | 224512 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g00613 | 822 | Pfam | Protein kinase domain | 502 | 768 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g00613 | 822 | ProSiteProfiles | Bulb-type lectin domain profile. | 13 | 134 | IPR001480 | - | |
Chy04g00613 | 822 | ProSiteProfiles | Protein kinase domain profile. | 501 | 788 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g00613 | 822 | PANTHER | - | 16 | 407 | - | - | |
Chy04g00613 | 822 | PANTHER | - | 434 | 819 | - | - | |
Chy04g00613 | 822 | ProSiteProfiles | PAN/Apple domain profile. | 325 | 406 | IPR003609 | - | |
Chy04g00613 | 822 | Gene3D | Transferase(Phosphotransferase) domain 1 | 577 | 790 | - | - | |
Chy04g00613 | 822 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 434 | 819 | - | - | |
Chy04g00613 | 822 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 16 | 407 | - | - | |
Chy04g00613 | 822 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 62 | 168 | IPR036426 | - | |
Chy04g00613 | 822 | CDD | B_lectin | 22 | 137 | IPR001480 | - | |
Chy04g00613 | 822 | Gene3D | - | 8 | 134 | IPR036426 | - | |
Chy04g00613 | 822 | Pfam | S-locus glycoprotein domain | 196 | 303 | IPR000858 | GO:0048544 | |
Chy04g00613 | 822 | Pfam | PAN-like domain | 329 | 391 | IPR003609 | - | |
Chy04g00613 | 822 | PIRSF | SRK | 1 | 822 | IPR024171 | GO:0004674 | |
Chy04g00613 | 822 | Pfam | Domain of unknown function (DUF3403) | 777 | 822 | IPR021820 | GO:0004674 | |
Chy04g00613 | 822 | SMART | serkin_6 | 501 | 772 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Chy04g00613 | 822 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 622 | 634 | IPR008271 | GO:0004672|GO:0006468 | |
Chy04g00613 | 822 | Pfam | D-mannose binding lectin | 61 | 163 | IPR001480 | - | |
Chy04g00613 | 822 | Gene3D | Phosphorylase Kinase; domain 1 | 475 | 576 | - | - | |
Chy04g00613 | 822 | CDD | PAN_AP_plant | 322 | 404 | - | - | |
Chy04g00613 | 822 | SUPERFAMILY | Protein kinase-like (PK-like) | 484 | 772 | IPR011009 | - | |
Chy04g00613 | 822 | SMART | ntp_6 | 326 | 405 | IPR003609 | - | |
Chy04g00613 | 822 | CDD | STKc_IRAK | 507 | 773 | - | - | |
Chy04g00613 | 822 | SMART | blect_4 | 19 | 137 | IPR001480 | - | |
Chy04g00613 | 822 | ProSitePatterns | Protein kinases ATP-binding region signature. | 507 | 529 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy01g02019 | Chy-Chr1:25086402 | Chy04g00613 | Chy-Chr4:6919317 | 5.53E-147 | dispersed | |
Chy04g00613 | Chy-Chr4:6919317 | Chy12g00999 | Chy-Chr12:15218140 | 0 | dispersed | |
Chy04g00612 | Chy-Chr4:6894298 | Chy04g00613 | Chy-Chr4:6919317 | 0 | tandem | |
Chy12g00994 | Chy-Chr12:15185240 | Chy04g00613 | Chy-Chr4:6919317 | 1.49E-09 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71179 | PF00069 | Pkinase | 1.50E-46 | CL0016 | Chy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g00613 | - | - | csv:116402699 | 1546.95 |