Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00613 ATGTTTTTATTTTCATCTTTCAATATCTATGTGGCTAATGATTTCTTAACATCTTCTCAAAACCTCAGTGATGGCAACACCTTGGTCTCTGGAAAAGGAATTTTCGAGCTGGGTTTCTTTCGTCCAGGAATCTCTAAGAACCGTTACTTGGGAATCTGGTACAAAACCATCCCAATCCCTACTGTTGTTTGGGTTGCCAACAGAGAAACTCCACTCATAGATTTTTCCAGTATATTAAGAATAAACACCACAGCGAATCGTGTTGTTCTCATCCAAAACGAAACTGTTATTTGGTCAGCAAAATCGTTGAAACCAATGGAAAATCCAAGGCTACAGCTTTTAGACACTGGAAATTTAGCCCTGAAAGATGGAAAGTCAGAGGAGATTTTGTGGCAAAGCTTTGATTATCCAACTGATACATTGTTGCCAGGAATGAAGCTGGGATGGGATTATGAAAATGGCATAAACAGACGATTATCAGCTTGGAAAAACTGGGACGACCCATCTCCTGGAACATTGATATTGGAAATGGAAAATCATAGCTATCCAGAACTCGCCATGTGGAATGGTACACAAGAAATCGTGAGAACTGGACCTTGGAATGGGATGCGGTTCAGCTCCAAATCCATTTCTGGTCTCCCAATTTTAGAGTACCATTATGGGAACAATAAAAATGAGCTTTATTTCAGCTTCCAGCTCATAAACAATTCTCTGATTGGTAGAATGGTATTGAACCAATCCAGGTCCAGGAGAGAGGCCTTACTGTGGTCAGAAGCTGAGAAAAACTGGATGATATATGCCACGATTCCAAGAGATTACTGCGACACATACAACGTTTGTGGTGCTTATGGGAATTGTGACATTGAAAATATGCCTGCTTGTCAATGTCTGAAAGGGTTTCAGCCAAGGGTGCTAGAGAATTGGAATCAAATGGATTATACAGAAGGGTGTGTCAGAACTAAGCATCTGAATTGCTGGGATGAAGTTGGGTTTGCAAAGTTACTAGGGATGAAATTGCCTGACACTACATATTCATGGGTTAATGAAAGCATGAGTTTAAGTGAATGCAGGGAAAAATGTTTGAGGAATTGTTCTTGTATGGCATTCGCAAATACAGATATTAGAGGATTAGGTAGTGGGTGTGCCATTTGGTTAAATGATCTTCTTGATATTAAAGTTGTTATCAAAGGTGGCCAAGACTTGTATGTTCGAATGCTTGCTTCTGAGTTAGGTATGTTTCTTATTCTCTGCCATAATTTTCATGCCATATCCTCTCTGACTCTGTTTCAAGTGCTTAATGAAGACACAACGAAGGCGAATTTGGTTATCATTGGCGTTATTGTTTCTGCTACGCTCCTTATAATTGCTGCCCTGGTTTTTGTTGGATTTTACATTATCAAAAGAAGGAAAATCCTTGAAGTTGAGAAACTTGATGTACAAGAGGAAGACTTGGAGCTCCCGTTATTTGACCTGTCAACAGTATCAAATGCTACTGACAATTTTTCAAACTCCAAAAAACTTGGAGAAGGTGGCTTTGGTGCAGTATTCTGGGGTAAACTGAAAGATGGACAAGAAATTGCTGTGAAAAGGCTTTCTAACTATTCAAGACAAGGAACTAATGAATTCAAGAATGAAGTAAAACTTATAGCCAAACTTCAGCATAGGAATCTTGTAAAGCTTCTGGGTTGCTGCATCCAAGAGAGAGAAAAAATGTTGATTTATGAATACATGCCTAATAAGAGCTTGAACTCTTTAATATTTGATCCTAATGGAAGGAAACTCTTAGATTGGTCAAAGCGATTCAATATCATATGTGGAATAGTTAGAGGGATTCTTTACCTTCATGAAGATTCTAGGTTGAGGATTATTCATAGAGATCTCAAACCAAGCAATATCTTGCTTGATATTGACATGAACCCCAAAATCTCAGATTTTGGAATGGCTAGAACTTTTGGTGAAGATCAAACCGAAGGAAATACTAGGAGAGTCGTTGGAACATATGGCTATATGGCACCAGAATATGCTATAGATGGACAATTTTCAATAAAATCAGATGTATTCAGTTTTGGCATACTACTATTAGAAATTATAAGTGGACAGAAGAATCAAGGATTTTATCGTCCAAACCAAACTTTCAATCTCATCGGACATGCATGGAAGTTATGGAATGAAGGAAGACCATTGGAATTGATTGACCCCTCAATTGGAGAGTCATATACTCTATCTGAAGTATTGAGATGCATCCATGTTAGTCTTTTATGCTTGCAACAACAGCCAGAAGATAGACCAATCATATCAGATGTGATTTCAATGCTAAATTGTGAGAGTACCTCCAAGTTGATGCAACCAAAACAACCAATATATTGCATGGACATGGATTCACTTAAAGAGGATTCTATTTCAAGCAAGAATGAAGCTTCTAGTTCTACCACCAACGAATTAACTGTTACTGTTGTAGAGGCTAGGTAG 2469 38.19 MFLFSSFNIYVANDFLTSSQNLSDGNTLVSGKGIFELGFFRPGISKNRYLGIWYKTIPIPTVVWVANRETPLIDFSSILRINTTANRVVLIQNETVIWSAKSLKPMENPRLQLLDTGNLALKDGKSEEILWQSFDYPTDTLLPGMKLGWDYENGINRRLSAWKNWDDPSPGTLILEMENHSYPELAMWNGTQEIVRTGPWNGMRFSSKSISGLPILEYHYGNNKNELYFSFQLINNSLIGRMVLNQSRSRREALLWSEAEKNWMIYATIPRDYCDTYNVCGAYGNCDIENMPACQCLKGFQPRVLENWNQMDYTEGCVRTKHLNCWDEVGFAKLLGMKLPDTTYSWVNESMSLSECREKCLRNCSCMAFANTDIRGLGSGCAIWLNDLLDIKVVIKGGQDLYVRMLASELGMFLILCHNFHAISSLTLFQVLNEDTTKANLVIIGVIVSATLLIIAALVFVGFYIIKRRKILEVEKLDVQEEDLELPLFDLSTVSNATDNFSNSKKLGEGGFGAVFWGKLKDGQEIAVKRLSNYSRQGTNEFKNEVKLIAKLQHRNLVKLLGCCIQEREKMLIYEYMPNKSLNSLIFDPNGRKLLDWSKRFNIICGIVRGILYLHEDSRLRIIHRDLKPSNILLDIDMNPKISDFGMARTFGEDQTEGNTRRVVGTYGYMAPEYAIDGQFSIKSDVFSFGILLLEIISGQKNQGFYRPNQTFNLIGHAWKLWNEGRPLELIDPSIGESYTLSEVLRCIHVSLLCLQQQPEDRPIISDVISMLNCESTSKLMQPKQPIYCMDMDSLKEDSISSKNEASSSTTNELTVTVVEAR* 823
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 6919317 6922303 + Chy4G073310.1 Chy04g00613 224512
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00613 822 Pfam Protein kinase domain 502 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00613 822 ProSiteProfiles Bulb-type lectin domain profile. 13 134 IPR001480 -
Chy04g00613 822 ProSiteProfiles Protein kinase domain profile. 501 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00613 822 PANTHER - 16 407 - -
Chy04g00613 822 PANTHER - 434 819 - -
Chy04g00613 822 ProSiteProfiles PAN/Apple domain profile. 325 406 IPR003609 -
Chy04g00613 822 Gene3D Transferase(Phosphotransferase) domain 1 577 790 - -
Chy04g00613 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 434 819 - -
Chy04g00613 822 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 407 - -
Chy04g00613 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 168 IPR036426 -
Chy04g00613 822 CDD B_lectin 22 137 IPR001480 -
Chy04g00613 822 Gene3D - 8 134 IPR036426 -
Chy04g00613 822 Pfam S-locus glycoprotein domain 196 303 IPR000858 GO:0048544
Chy04g00613 822 Pfam PAN-like domain 329 391 IPR003609 -
Chy04g00613 822 PIRSF SRK 1 822 IPR024171 GO:0004674
Chy04g00613 822 Pfam Domain of unknown function (DUF3403) 777 822 IPR021820 GO:0004674
Chy04g00613 822 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00613 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Chy04g00613 822 Pfam D-mannose binding lectin 61 163 IPR001480 -
Chy04g00613 822 Gene3D Phosphorylase Kinase; domain 1 475 576 - -
Chy04g00613 822 CDD PAN_AP_plant 322 404 - -
Chy04g00613 822 SUPERFAMILY Protein kinase-like (PK-like) 484 772 IPR011009 -
Chy04g00613 822 SMART ntp_6 326 405 IPR003609 -
Chy04g00613 822 CDD STKc_IRAK 507 773 - -
Chy04g00613 822 SMART blect_4 19 137 IPR001480 -
Chy04g00613 822 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g02019 Chy-Chr1:25086402 Chy04g00613 Chy-Chr4:6919317 5.53E-147 dispersed
Chy04g00613 Chy-Chr4:6919317 Chy12g00999 Chy-Chr12:15218140 0 dispersed
Chy04g00612 Chy-Chr4:6894298 Chy04g00613 Chy-Chr4:6919317 0 tandem
Chy12g00994 Chy-Chr12:15185240 Chy04g00613 Chy-Chr4:6919317 1.49E-09 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71179 PF00069 Pkinase 1.50E-46 CL0016 Chy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00613 - - csv:116402699 1546.95