Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00641 ATGAGTCGGGATCTGAAGCGAGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTCGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAGATTGGAGATTGCATAACTCTGTTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTTGCTGGGGATTGTGCAAGTGGTCACAAGAAAGCTCATTCTGGAACAAGCTCGGAGCTGAAATGTGATATTACTGATTCCTGTTCACAGATGATTCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCGGGTTCACCGAGTGGGGCTGTAGCTGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAGTGCAACATTGTGGTAATGAAACGATCACAACCAAAAGTTCTTCGTTTGAACCTGGTTGGGTCTCCAAAGAAGGAACCAGAAGTTCCCTCTCCGTCACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATACTGACCCTCTAGATTTCATACGGGGACCAGTTGTGACTCCCAGTAGCAGTCCAGAATTGGGCACACCTTTTACTGCTACCGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTCAACTCTGAAATGAATGGAGACACAAAGAAGGAGGAATTGTTTGTTATAAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCTGATATTGAGAATTTATCTGTATCGTCTGCAAGTTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATTAGTGGAAGGTCACAGAGATGTGATGATAGGAATCAAGCGTCAACAAGAAATTCTTTTCTACCGAAGTCTTCTAAACTTGACAGAGAATCAAGTATTGGAATGTCAAGCCATAGAAGTGACAATGATTTTCAGGGGGACGTACGAGATGCAGTTTCATTATCCAGGAACACGCCACCAGGCCCTCCTCCATTGTGTTCAATATGCCAACACAAGGCACCAGTTTTTGGAAAGCCTCCAAGGTGGTTCAGCTATGCTGAGCTGGAGCTTGCTACTGGTGGATTTTCACAAGCTAACTTTTTGGCTGAAGGAGGATATGGATCTGTCCACAGAGGGGTACTCCCAGATGGACAGGTGGTCGCTGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGGGATCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAGCATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAGAGAAGGTTGTTGGTGTATGAATACATCTGCAATGGTTCATTGGATTCTCATTTATATGGACGCCAACAAGAGCCACTTGAATGGTCTGCACGGCAAAAAATTGCCGTAGGAGCTGCAAGGGGGTTACGATATCTCCACGAAGAATGTAGAGTTGGTTGCATTGTTCATCGGGATATGCGGCCAAACAACATTCTTATCACACATGATTTTGAACCACTAGTTGGAGATTTTGGCCTTGCAAGGTGGCAGCCTGACGGAGATACCGGTGTTGAAACAAGAGTTATCGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACAGAAAAAGCTGATGTTTATTCCTTTGGGGTCGTACTGGTGGAGCTAATTACTGGAAGAAAAGCAGTAGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCCCGCCCCCTGCTGGATGAATTTCTCATTGATGAACTGATTGATCCAAGGTTGGTAAATAGCTTTGCAGAGCATGAAGTGTACTGTATGCTGCATGCTGCATCATTATGCATCCGAAGAGATCCCAACGCAAGGCCTCGTATGTCACAGGTTTTACGGATTCTGGAAGGCGACCTCGTCATGGATGCTAATTACTTTTCCACTCCCGGATATGATGTGGGAAACCGGAGTGGTCGGATGTGGACTGAGCAACAGCAGCAGCCACAAAACTACAGTGGCTTGTTATCGGATGAGACTGTAGAAAGGTTCAATGAAAAGGTCTGTGTTGAAAGTTTAAGACCAGGTTACTGGGAAAGAGACAAGACAAGGAGGACTTCCAGTGGAAGTGAATTGTAA 2256 44.24 MSRDLKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGAVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEPEVPSPSPSDIDEGSESHQKENTDPLDFIRGPVVTPSSSPELGTPFTATEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDRNQASTRNSFLPKSSKLDRESSIGMSSHRSDNDFQGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLVNSFAEHEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLVMDANYFSTPGYDVGNRSGRMWTEQQQQPQNYSGLLSDETVERFNEKVCVESLRPGYWERDKTRRTSSGSEL* 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7348350 7352597 + Chy4G073590.1 Chy04g00641 224540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00641 751 PANTHER OS01G0253100 PROTEIN 15 710 IPR045271 GO:0004714|GO:0006468
Chy04g00641 751 MobiDBLite consensus disorder prediction 175 255 - -
Chy04g00641 751 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Chy04g00641 751 Gene3D HUPs 5 151 IPR014729 -
Chy04g00641 751 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672|GO:0006468
Chy04g00641 751 ProSiteProfiles Protein kinase domain profile. 405 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00641 751 Pfam Protein tyrosine and serine/threonine kinase 409 674 IPR001245 GO:0004672|GO:0006468
Chy04g00641 751 MobiDBLite consensus disorder prediction 322 341 - -
Chy04g00641 751 Gene3D Transferase(Phosphotransferase) domain 1 481 685 - -
Chy04g00641 751 CDD STKc_IRAK 411 677 - -
Chy04g00641 751 CDD USP_Like 19 142 - -
Chy04g00641 751 MobiDBLite consensus disorder prediction 311 356 - -
Chy04g00641 751 MobiDBLite consensus disorder prediction 342 356 - -
Chy04g00641 751 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 15 710 - -
Chy04g00641 751 MobiDBLite consensus disorder prediction 220 254 - -
Chy04g00641 751 SUPERFAMILY Protein kinase-like (PK-like) 389 683 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01204 Chy-Chr2:8682493 Chy04g00641 Chy-Chr4:7348350 0 dispersed
Chy03g00565 Chy-Chr3:8099580 Chy04g00641 Chy-Chr4:7348350 1.95E-105 dispersed
Chy04g00641 Chy-Chr4:7348350 Chy05g01369 Chy-Chr5:17799292 1.72E-99 dispersed
Chy11g00254 Chy-Chr11:2389548 Chy04g00641 Chy-Chr4:7348350 3.01E-76 dispersed
Chy11g00389 Chy-Chr11:3684568 Chy04g00641 Chy-Chr4:7348350 1.08E-99 dispersed
Chy04g00641 Chy-Chr4:7348350 Chy04g00545 Chy-Chr4:5499304 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71185 PF07714 PK_Tyr_Ser-Thr 1.00E-40 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00641 - - csv:101206876 1478.77