Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00664 ATGATGGAAGAGATGTCCCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGTAAATCCTGGCCATGTTGAATTTACACGGCTAAAGTTAGTGACAGACACAGTAAATTTATTCTCTGCATCGTCCCCTGAGTCTGGTTCTATTGGTAATGGTAGTTGCCATGATTTTGATGGTTTAGTTGACAGTGTAACTGTGTCGCAACCGACTGATGGTGGTCAAGGTATAGACAGTTTTTGGGGGTTGCTGCCGAAGAGTGGCACGAATTTGACTGTAGATAAGAAAGATGCATCCTTGGCTACTCTGGATGACCCTGATGAAATGATAGAGGATGGATTGTTTGCTATTGATGGCGGTACAAGTATCAACGTGCAAGAAGTTGTCAAAATCGGCGATGTTAGTAATGGTCATATTGTTGCTAAGGCGATCATCCTGGTCGAATCAGGGAAGATCCCTACTAGTGAACTTATTGTGGCGACAGTAAGCCCAGATTTAGAAGTATCTGCATCGTCCGAGCTGAACGTTCCTGCAGTAGTTTTCCAATCGAAAGGGGCAGAAAGTGTTCATAAAGTCATTCGTAATGTCTTTGAACGCGATTGTATTCCTCTTTGGGGGTCCGTATCGATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCTACTGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGGAATAGTTTGCTGAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCAAGAACGCATACACTTGGCACTAGCTGAAGAGATAAAAGGATTTAAACAGAATCTAGAAAATGGAAACAATGGAGAAAACTGGCAGCAGGATTGGGAGAGAACCTTCAACAATTGCTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGACCAGTCAGTGGAAGCAGTGGAGATGTTTCCCATACAAGCTTCGAACCTGTTGCCCCGGAAACTGTTGGCTCTACGGCTGTTGTTGCCTTGGTCTGTTCGTCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTTCTATGCCGTGGTAAAGAACCCATGGCTCTATCGGTCGATCATAAACCAAATCGCGAAGATGAATATGCTAGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAACGGACATCGTGTCTTCGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAGCCATGGATTATTCCCGATCCAGAAGTCATGTTCATCCCTCGTGCCAAAGAAGATGAATGTCTTATTTTAGCCAGCGATGGACTGTGGGATGTGATGACAAATGAGGAAGTCTGTGAAGTAGCTCGAAGGCGGATTCTTCTTTGGCACAAGAAACACGGGGCTTCATCTCTTGCTGATCGGGGCACAGGAGTTGACCCAGCTGCACAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTGA 1611 43.95 MMEEMSPAVSLTLSLGNPKSDSSVNPGHVEFTRLKLVTDTVNLFSASSPESGSIGNGSCHDFDGLVDSVTVSQPTDGGQGIDSFWGLLPKSGTNLTVDKKDASLATLDDPDEMIEDGLFAIDGGTSINVQEVVKIGDVSNGHIVAKAIILVESGKIPTSELIVATVSPDLEVSASSELNVPAVVFQSKGAESVHKVIRNVFERDCIPLWGSVSICGRRPEMEDAIATVPCFAKIPIKMLVGNSLLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCQERIHLALAEEIKGFKQNLENGNNGENWQQDWERTFNNCFLRVDDEIEGKVGRPVSGSSGDVSHTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFIPRAKEDECLILASDGLWDVMTNEEVCEVARRRILLWHKKHGASSLADRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS* 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7650706 7652943 - Chy4G073820.1 Chy04g00664 224563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00664 536 MobiDBLite consensus disorder prediction 1 24 - -
Chy04g00664 536 SMART PP2C_4 198 524 IPR001932 -
Chy04g00664 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Chy04g00664 536 PANTHER ALPHABET, ISOFORM E-RELATED 112 536 - -
Chy04g00664 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
Chy04g00664 536 CDD PP2Cc 210 526 IPR001932 -
Chy04g00664 536 PANTHER PROTEIN PHOSPHATASE 2C 16 112 536 - -
Chy04g00664 536 Gene3D - 195 536 IPR036457 -
Chy04g00664 536 MobiDBLite consensus disorder prediction 10 24 - -
Chy04g00664 536 SUPERFAMILY PP2C-like 199 527 IPR036457 -
Chy04g00664 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01154 Chy-Chr2:8273182 Chy04g00664 Chy-Chr4:7650706 1.63E-90 dispersed
Chy03g00673 Chy-Chr3:9296848 Chy04g00664 Chy-Chr4:7650706 0 dispersed
Chy04g00664 Chy-Chr4:7650706 Chy06g00889 Chy-Chr6:6418046 6.68E-69 dispersed
Chy04g00664 Chy-Chr4:7650706 Chy12g00232 Chy-Chr12:2656877 4.56E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00664 K14497 - csv:101203499 1068.14