Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00712 ATGAGACCTTTCCAGCCCCCTCCAGCTACAAATCCTCCCACCGATCGTACTCGTCGCCGCCCCCATCTAAATCTCCATCTTCCTCAACGTGACAACACATCTTTGGCTGTTCCTCTTCCTTTGCCTCCTACCTCCTCCAACTCTGCCCCTCCTCCTTCCACCAGTCAACTCCACAACGCCAATCGCCCCCCTGACCCTCTTCCTCCCCAACGTCAACCTTTCACCCTTTCTGACTTTGAGCGTGTCAGCCGAATCGGAAGTGGATGTGGAGGTACCGTTTACAAAGTCCTTCACCGTCCCACCGGTCATGTTTATGCTCTCAAGGTCATTTACGGAAACCATGAAGATGCGGTTAGGCTTCAGATGTGCCGTGAGGTCGAGATCCTTCGTGACGTTGACAATCCCTATGTTGTTAAGTGCCACGATATGTTTGATCATAACGGTGAAATCCAGGTTCTTCTTGAGTATATGGATCGGGGTTCTTTGGAAGGAACACACATCCCTCAAGAACATCAACTCTCTGATTTGGCTCGCCAGATTCTTAGCGGTCTTGCTTATCTTCATAGCCGACGTATCGTTCATCGCGATATCAAACCCTCCAATCTTCTCATCAATTCTCGAAGGCAGGTTAAGATCGCTGATTTTGGCGTCGGTCGAATCTTGGAACAGACTATGGACCCTTGTAATTCCTCGGTTGGGACTATTGCGTATATGAGCCCTGAGAGAATCAATTCCGATCTAAATCAGGGTCAGTACAATGGTTATGCAGGGGATATTTGGAGCTTTGGGGTTAGCATATTGGAATTCTATCTTGGTCGCTTTCCTCTTGCTGTTGAGAGGCCTGGGGATTGGGCTAGCTTGATGTGTGCTATATGTATGGCTCAGCCACCGGAGGCCCCGGCCACTGCTTCACCGGAGTTTCGCCACTTTATTGCTTGTTGTTTGCAAAGAGAAGCTCGGAAGAGATGGACTGCCGCTGCATTACTGGAGCATGCGTTCATAACAAGGAAAAATGGAGCGAGTCAGTACCAGAACAAGCAAGCTCATCATCAGAATCTTCGTCAACTATTACCTCCTCCGCCTCTTCATCCTCCCAGCCTTTCTTGA 1107 49.41 MRPFQPPPATNPPTDRTRRRPHLNLHLPQRDNTSLAVPLPLPPTSSNSAPPPSTSQLHNANRPPDPLPPQRQPFTLSDFERVSRIGSGCGGTVYKVLHRPTGHVYALKVIYGNHEDAVRLQMCREVEILRDVDNPYVVKCHDMFDHNGEIQVLLEYMDRGSLEGTHIPQEHQLSDLARQILSGLAYLHSRRIVHRDIKPSNLLINSRRQVKIADFGVGRILEQTMDPCNSSVGTIAYMSPERINSDLNQGQYNGYAGDIWSFGVSILEFYLGRFPLAVERPGDWASLMCAICMAQPPEAPATASPEFRHFIACCLQREARKRWTAAALLEHAFITRKNGASQYQNKQAHHQNLRQLLPPPPLHPPSLS* 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8666146 8667252 + Chy4G074300.1 Chy04g00712 224611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00712 368 Pfam Protein kinase domain 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00712 368 Gene3D Phosphorylase Kinase; domain 1 67 158 - -
Chy04g00712 368 ProSiteProfiles Protein kinase domain profile. 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00712 368 SUPERFAMILY Protein kinase-like (PK-like) 55 353 IPR011009 -
Chy04g00712 368 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 15 354 - -
Chy04g00712 368 SMART serkin_6 79 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00712 368 CDD PKc_MAPKK_plant_like 77 335 - -
Chy04g00712 368 Gene3D Transferase(Phosphotransferase) domain 1 160 357 - -
Chy04g00712 368 MobiDBLite consensus disorder prediction 1 74 - -
Chy04g00712 368 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
Chy04g00712 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Chy04g00712 368 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 354 - -
Chy04g00712 368 MobiDBLite consensus disorder prediction 340 368 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00712 Chy-Chr4:8666146 Chy12g01379 Chy-Chr12:17994198 8.14E-98 dispersed
Chy04g00712 Chy-Chr4:8666146 Chy05g01452 Chy-Chr5:18365650 8.39E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71189 PF00069 Pkinase 6.90E-60 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00712 K13413 - csv:101219669 679.863