Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00713 ATGGATCAAGATAAGAAGAAAATAGCTTTGGAGGAGAAGATGGAATCAACAGAGGAGAAAACAAATTACTTATCAGATGAAGAAATTCCATTGAAGTCATCGCCAGTTGCGAACGTATTGCATAGTTTTGATTGTGAGACGGCTGCTGTGCGTTCTTCCCCAGATACAAGATGGTGGAAGACTAGCAACATTCGTATTAGACCTCTTAGAAGTGCTTATATAGTGTTGGTTAGAGCAAAGATCAACGTGTTACTACCTTTTGGTCCTTTGGCAGTTCTGCTACATTACTTAACGGGAAAGCATGGATGGGTCTTCTTTTGCACTTTACTTGGAATTACACCCTTGGCAGAACGTCTTGGTTATGCAACCGAGCAGCTTGCTTTCTACACTGGACCAACAGTTGGTGGTCTTTTGAATGCAACATTTGGAAATGCAACTGAAATGATCATATCAATATATGCGTTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCATTGCTGGGGTCAATCTTGTCAAATATGCTCCTTGTGCTTGGTTGCGCTTTCTTCACTGGTGGGATTATTCATCATACAAAGGTGCAGGTTTTCAATAAGGGCGCTGCTGTTGTGAATTCAGGATTGTTGTTGATGGCTGTAATGGGAACGACTTTTCCGGCCGTGCTTCATTTCACCCACACAGAACTTCATTTGGGAGAGTCAGCATTATCTCTTTCAAGATTTAGCAGTTGTATAATGTTAATTGCATATGCAAGCTACCTTTTCTTTCAACTAAAAAGTCAGCATGATCTCTATGGTCCTCTTGACGAGGAAGTTAATGGAGAAGTTGAGGACGATTCTGAGATTTATGCTTGGGAAGCAATTGGATGGCTTGCCATCCTGACTGTATGGGTATCTGTTTTATCTGGATACCTTGTTGATGCTATCCAGGGAGCATCTGAATCATTAAATTTGCCAGTGGCATTTATTAGTGTAATTTTGTTGCCAATTGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTGACATCACTCTTGGAGTTGCTATTGGATCATCTACACAAATATCCATGTTTGTGATCCCGTTTTGCGTAGTAGTTGGATGGTGCATGGGAAAACCAATGGACTTAAACTTTAAACTCTTTGAAACAGCAACGTTGTTCATCACTGTGCTAGTAGTGGCCTTTATGTTGCAGATGATGATTAACACTTGGAGCACGTTTGGTCATGGAAATTTACTGCAAGCTGAACTTTTGCATTTGCATTGGTTCTGA 1296 40.74 MDQDKKKIALEEKMESTEEKTNYLSDEEIPLKSSPVANVLHSFDCETAAVRSSPDTRWWKTSNIRIRPLRSAYIVLVRAKINVLLPFGPLAVLLHYLTGKHGWVFFCTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIIHHTKVQVFNKGAAVVNSGLLLMAVMGTTFPAVLHFTHTELHLGESALSLSRFSSCIMLIAYASYLFFQLKSQHDLYGPLDEEVNGEVEDDSEIYAWEAIGWLAILTVWVSVLSGYLVDAIQGASESLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKPMDLNFKLFETATLFITVLVVAFMLQMMINTWSTFGHGNLLQAELLHLHWF* 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8668034 8673724 + Chy4G074310.1 Chy04g00713 224612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00713 431 Gene3D - 132 421 IPR044880 -
Chy04g00713 431 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 14 409 IPR004713 GO:0006812|GO:0008324|GO:0016021
Chy04g00713 431 TIGRFAM caca2: calcium/proton exchanger 75 406 - -
Chy04g00713 431 PANTHER VACUOLAR CATION/PROTON EXCHANGER 14 409 - -
Chy04g00713 431 Pfam Sodium/calcium exchanger protein 103 258 IPR004837 GO:0016021|GO:0055085
Chy04g00713 431 Pfam Sodium/calcium exchanger protein 288 409 IPR004837 GO:0016021|GO:0055085
Chy04g00713 431 TIGRFAM cax: calcium/proton exchanger 84 405 IPR004798 GO:0006816|GO:0015369
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00713 Chy-Chr4:8668034 Chy11g00737 Chy-Chr11:10002068 0 dispersed
Chy04g00713 Chy-Chr4:8668034 Chy04g02251 Chy-Chr4:27196737 7.33E-95 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00713 K07300 - csv:101219432 762.296