Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00715 ATGGTGAAGAAGTGGAGTTGGGGAGAGCCGTTGCTGCTAGTCAGTATCTGCATTTTGGGATGGAGGATTAGTTTTATCAATGGAGCTACGGATCCAGGAGATGTATCGGCTCTAAATGCCATGTATAGTAGTTTAAACTCTCCTCCAATTCTAACACAATGGAGTTCGAGTGGTGGAGATCCATGTGGACAAATTTGGAAAGGCATTACTTGCTTGGGCTTAAGGGTCACAGAAATTTCATTGTCTGGTTTAGGACTTTCTGGAACACTGGGATACCAGCTTTCAAGTTTGACATCCCTAACTAATCTAGATGTGAGTAACAACAATCTTGGACCTGACATACCTTATCAGCTCCCTCAAAACTTGCAAAAACTAAACCTTGGATGGAATAACTTCAGTGGAAGCATCCCCTATTCTATTTCTCAAATGAGTTTGCTTATTTCCTTGAACATGAGCCACAATCAGCTTCAGAATCAAGTGAATGATATGTTCTGGAAGCTTTCTTCCCTGGCCATGTTGGACGTCTCTTTCAATTTTCTGTCAGGTGCCCTCCCCCAGAGTTTTAGCAACCTTACCAGTCTTAACGCTATGTTTCTGCAAAACAACCAATTCAGTGGCACTATTGATGTTCTTGCAAATCTTCCGCTACAAAATTTGAATGTCGAGAACAACCATTTTACTGGTTGGGTTCCTGAACGATTGAAGAATATAAATATTCAGGAGGGTGGAAATTCTTGGAGCTTTGGGCTTGCACCCCCACCTCCGCCTGGGACTCCTACAGCCAACCAAAATTACAGATATCACAAGGCTGGGAACAGTTACAGCCCACTGAGTAGTGATGCTGCTGGTGGGGGTAGCAATAGATCAGGAATCGGTGGTGGTGCCATTGCTGGAATTCTTATATCTGTGCTAGTGGTAGGAGCAATACTAGCATATCTTCTAGTAAAGAGAAGATCCAAGAGGCCATCCACAGACATAGAAAAGCAAAAGCATGGGAACTTGCCTATTGTATCTCCTGCTTCAAATGAAGTGCAAGATGCATTGGCAGAGATGAAGCTTGTTCATACTTCATCCTCATTTGATGCAAAAGAATTGGACTCTCCTGCTTCAATCAATCTTAAACCCCCACCTATTGATCGTTATAAATCATTTGATGACAATGATACATCAAAGGTACCTGTGGTGAAGAAGACCAATGTCACTGCTCCGATAAGTGTGAAATCATATTCAATAGCAGATCTGCAAATGGCTACAGGTAGTTTCAATGTAGAAAACCTTCTTGGTGAGGGATCACTTGGACGTGTTTATCGGGCTCAGTTCAACGATGGGAAGGTTCTTGCAGTGAAGAAAATAGATTCAGCTGCCTTCCGTGGAGAATTGTTGGAAGATTTCACAGAGATTGTTGCTAATATATCTCAGCTGCATCATCCTAATGTAACCGAGCTAACAGGCTATTGCTCAGAGCATGGCCTGCATTTGCTAATATACGAGTTCCATAAGAATGGCTCACTACATGACTTCTTGCACATATCAGATGAATATAGCAAGCCACTGACTTGGAACTCACGTGTCAAGATTGCTTTAGGGACGGCCCGTGCTTTAGAGTACCTGCATGAAGTTTGTGCCCCGTCAGTTGTTCACAGAAATATCAAGTCAGCCAATATCTTACTAGATGCTGAAATGAATCCTCATCTCTCCGATTGTGGTCTGGCTAGCTTTATAACCAATCTAGATCACGCATTGGATCAACAGGCAGGATCTGGGTACAGTGCTCCTGAGGTTACCATGTCTGGTCAATATACATTAAAAAGCGACGTATATAGTTTTGGAGTGGTGATGTTAGAACTTCTAAGCGGACGTAAGCCATTTGATAGTTCAAGGCCAAGGGCTGAGCAATCCTTGGTTCGATGGGCTACGCCTCAGCTCCATGATATTGATGCCTTGACAAAAATGGTTGATCCTGCACTTAAAGGGCTCTACCCAGTTAAGTCTCTTTCGAGATTTGCAGACGTTGTAGCTCTTTGCGTCCAGCCTGAGCCTGAATTCAGACCACCCATGTCAGAGGTGGTGGAAGCGTTGGTTCGGCTTGTGCAGAGGTCCAACATGAGCAGAAGAACGTTTGGAAGTGATCATGGATCATCTTTTAGAACTGATGATCTTGAAGCACGTGAGACATCTTAA 2181 43.42 MVKKWSWGEPLLLVSICILGWRISFINGATDPGDVSALNAMYSSLNSPPILTQWSSSGGDPCGQIWKGITCLGLRVTEISLSGLGLSGTLGYQLSSLTSLTNLDVSNNNLGPDIPYQLPQNLQKLNLGWNNFSGSIPYSISQMSLLISLNMSHNQLQNQVNDMFWKLSSLAMLDVSFNFLSGALPQSFSNLTSLNAMFLQNNQFSGTIDVLANLPLQNLNVENNHFTGWVPERLKNINIQEGGNSWSFGLAPPPPPGTPTANQNYRYHKAGNSYSPLSSDAAGGGSNRSGIGGGAIAGILISVLVVGAILAYLLVKRRSKRPSTDIEKQKHGNLPIVSPASNEVQDALAEMKLVHTSSSFDAKELDSPASINLKPPPIDRYKSFDDNDTSKVPVVKKTNVTAPISVKSYSIADLQMATGSFNVENLLGEGSLGRVYRAQFNDGKVLAVKKIDSAAFRGELLEDFTEIVANISQLHHPNVTELTGYCSEHGLHLLIYEFHKNGSLHDFLHISDEYSKPLTWNSRVKIALGTARALEYLHEVCAPSVVHRNIKSANILLDAEMNPHLSDCGLASFITNLDHALDQQAGSGYSAPEVTMSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRAEQSLVRWATPQLHDIDALTKMVDPALKGLYPVKSLSRFADVVALCVQPEPEFRPPMSEVVEALVRLVQRSNMSRRTFGSDHGSSFRTDDLEARETS* 727
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 8714168 8720992 + Chy4G074330.1 Chy04g00715 224614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00715 726 Pfam Leucine rich repeat 121 178 IPR001611 GO:0005515
Chy04g00715 726 SUPERFAMILY Protein kinase-like (PK-like) 402 693 IPR011009 -
Chy04g00715 726 SUPERFAMILY L domain-like 30 236 - -
Chy04g00715 726 PANTHER OS01G0253100 PROTEIN 20 720 IPR045271 GO:0004714|GO:0006468
Chy04g00715 726 Gene3D Phosphorylase Kinase; domain 1 383 498 - -
Chy04g00715 726 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Chy04g00715 726 Pfam Protein tyrosine and serine/threonine kinase 423 693 IPR001245 GO:0004672|GO:0006468
Chy04g00715 726 Gene3D Ribonuclease Inhibitor 31 250 IPR032675 -
Chy04g00715 726 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 20 720 - -
Chy04g00715 726 SMART LRR_typ_2 167 190 IPR003591 -
Chy04g00715 726 SMART LRR_typ_2 97 121 IPR003591 -
Chy04g00715 726 SMART LRR_typ_2 143 166 IPR003591 -
Chy04g00715 726 MobiDBLite consensus disorder prediction 705 726 - -
Chy04g00715 726 ProSiteProfiles Protein kinase domain profile. 421 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00715 726 MobiDBLite consensus disorder prediction 711 726 - -
Chy04g00715 726 Gene3D Transferase(Phosphotransferase) domain 1 500 717 - -
Chy04g00715 726 CDD STKc_IRAK 427 696 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00715 Chy-Chr4:8714168 Chy04g01764 Chy-Chr4:24002657 3.38E-155 dispersed
Chy02g00271 Chy-Chr2:1771893 Chy04g00715 Chy-Chr4:8714168 2.91E-45 transposed
Chy03g00317 Chy-Chr3:3599734 Chy04g00715 Chy-Chr4:8714168 0 transposed
Chy06g02006 Chy-Chr6:24009750 Chy04g00715 Chy-Chr4:8714168 1.92E-66 transposed
Chy12g00528 Chy-Chr12:7317261 Chy04g00715 Chy-Chr4:8714168 0 transposed
Chy01g02121 Chy-Chr1:25887747 Chy04g00715 Chy-Chr4:8714168 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71190 PF07714 PK_Tyr_Ser-Thr 5.90E-42 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00715 - - csv:101208239 1387.09