Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00756 ATGGAGCCTTCTCTTGAACTTTCACAAACTCCTGAGCAGATTATACTACGCTGGGATTCTGCCGCACCGGAGGAGGTCAAAGATAAGATGATTTTTGACTCCGACAGGGAAGAGATCGACCGTTACTTGCAGGCTGTCGATGAAATCCAGAGGTCTATGTCCTCTGCTCCCATTTCTGACGATCACAACAAAGCTGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAAGATGAGTTTCGTCACATTCTCTCCAGTCATACCACTCCGATCGAGGTTGACTCGCTTACTGATCCCAGTCCCTCTTCTCGTTCTATGTCCACTAGTGGTAGTGGTGTGTTCGAGGATGAAAACGACGATGAACCCGACTTAAACGAAGTTCAGCTTGATTTAACAGGTAGTCCAAGTTTTGGGTCCAGTGGTCGATCCAGCTACCGGGCCACTAGTAGTATTCGTGAAATTGATCTCATACCTTCCGATGCGGTTATTGATCTACGAAGTATTGCTGAGAGGATGATATCGGCGGGTTACCTGCGCGAGTGCATCCAAGTTTATGGCAGTGTGCGGAAGTCCACCTTCGATTCCAGCTTCCGGCGGCTCGGAATTGAAAAACTAAGCATTGGAGATATCCAGAGGCTGGATTGGAACGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGGAGCTAAGGTTTCTATTAGGACTTTGTTTTCCAGTGAGAAGAAACTTTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGATGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTAACTCAGTTGTTCAATTTCGCAGAGGCGATCAGTATAAGCCGCAGATCGTCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTGACGGAGTTGATACCTGACATTGATGTGATATTCGAATCAAAATCGGCGGAGTATATTCGGATTCAGGCCACGGAGATAGTGTCGCGGCTAGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCAGTGCTGCGGGAGCCGTCACTGCATCCAGTTCCCGGCGGGACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCTCGATTCCAGATATGGACTTCGGTGAGCTAGAGGGAAAAACACCATTAGCGCTCCATCTTATATGGAGTATCGTGATTCTACAATTTAATTTGGAGGGGAAGTCCCGGCACTACAGAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAAAAGATAAAAGGATCGCCGGAGTTGCGAGAAATGATCGGAGATGTTTATCTGAAAAGACTTACCGGGAAGTATCGACAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTACGAAACGAAGGGTTGAATGTGGGGGGGAGCTTATCTTCCGGCCCTGCAAAGAGCCTAATTAGAGATAGATTCAAGACTTTCAACGCCATGTTCGAGGAGGTTCACAGGACACAATCATCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTACGCATATCCATAATTGAGAAGTTGATCCCAGCCTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAGACACCCCGAAAATTACATCAAATACTCGGTTGAGGAACTCGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCTGTAACCCATAACTTGAGAAGGAGATCTCACTGA 1833 47.79 MEPSLELSQTPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSAPISDDHNKADSTMQIAMARLEDEFRHILSSHTTPIEVDSLTDPSPSSRSMSTSGSGVFEDENDDEPDLNEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRGAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSSEKLFKILDLHDALTELIPDIDVIFESKSAEYIRIQATEIVSRLAEAVRGTLSEFENAVLREPSLHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPSIPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKYRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSSWLIPDSQLREELRISIIEKLIPAYRSFLGLHGHHIESGRHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH* 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9618640 9620472 + Chy4G074740.1 Chy04g00756 224655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00756 610 MobiDBLite consensus disorder prediction 90 144 - -
Chy04g00756 610 PANTHER EXOCYST COMPLEX PROTEIN EXO70 9 609 IPR004140 GO:0000145|GO:0006887
Chy04g00756 610 MobiDBLite consensus disorder prediction 90 113 - -
Chy04g00756 610 Pfam Exo70 exocyst complex subunit 224 593 IPR046364 GO:0000145|GO:0005546|GO:0006887
Chy04g00756 610 MobiDBLite consensus disorder prediction 129 144 - -
Chy04g00756 610 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 9 609 - -
Chy04g00756 610 Gene3D Exocyst complex component Exo70 130 606 - -
Chy04g00756 610 Gene3D Exocyst complex component Exo70 14 115 - -
Chy04g00756 610 SUPERFAMILY Cullin repeat-like 12 597 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00756 Chy-Chr4:9618640 Chy12g01170 Chy-Chr12:16583153 6.01E-155 dispersed
Chy12g01498 Chy-Chr12:18822797 Chy04g00756 Chy-Chr4:9618640 1.85E-94 dispersed
Chy04g00756 Chy-Chr4:9618640 Chy11g01268 Chy-Chr11:18902583 1.51E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00756 K07195 - csv:101204229 1155.58