Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy04g00756 | ATGGAGCCTTCTCTTGAACTTTCACAAACTCCTGAGCAGATTATACTACGCTGGGATTCTGCCGCACCGGAGGAGGTCAAAGATAAGATGATTTTTGACTCCGACAGGGAAGAGATCGACCGTTACTTGCAGGCTGTCGATGAAATCCAGAGGTCTATGTCCTCTGCTCCCATTTCTGACGATCACAACAAAGCTGATTCCACTATGCAGATCGCCATGGCTAGGCTTGAAGATGAGTTTCGTCACATTCTCTCCAGTCATACCACTCCGATCGAGGTTGACTCGCTTACTGATCCCAGTCCCTCTTCTCGTTCTATGTCCACTAGTGGTAGTGGTGTGTTCGAGGATGAAAACGACGATGAACCCGACTTAAACGAAGTTCAGCTTGATTTAACAGGTAGTCCAAGTTTTGGGTCCAGTGGTCGATCCAGCTACCGGGCCACTAGTAGTATTCGTGAAATTGATCTCATACCTTCCGATGCGGTTATTGATCTACGAAGTATTGCTGAGAGGATGATATCGGCGGGTTACCTGCGCGAGTGCATCCAAGTTTATGGCAGTGTGCGGAAGTCCACCTTCGATTCCAGCTTCCGGCGGCTCGGAATTGAAAAACTAAGCATTGGAGATATCCAGAGGCTGGATTGGAACGAGCTGGAGACGAAGATCAGAAGGTGGATTAGAGGAGCTAAGGTTTCTATTAGGACTTTGTTTTCCAGTGAGAAGAAACTTTGCGAGCAAATTTTTTATGGCATAGGGACCGCCATAGATGATGCTTGTTTCATGGAGACTGTAAAAGGTCCTGTAACTCAGTTGTTCAATTTCGCAGAGGCGATCAGTATAAGCCGCAGATCGTCGGAGAAGCTGTTCAAGATTCTAGACCTCCACGATGCCTTGACGGAGTTGATACCTGACATTGATGTGATATTCGAATCAAAATCGGCGGAGTATATTCGGATTCAGGCCACGGAGATAGTGTCGCGGCTAGCGGAGGCCGTCAGAGGGACTTTATCGGAGTTTGAAAATGCAGTGCTGCGGGAGCCGTCACTGCATCCAGTTCCCGGCGGGACGCTTCATCCGTTGACAAGGTACGTAATGAACTATGTGAGTCTGATTTCGGACTACAAAGTGACCTTAGACGAGCTCATCGTGTCCAAACCATCGACGGGCTCGAGGTACTCGGCCGACCCCTCGATTCCAGATATGGACTTCGGTGAGCTAGAGGGAAAAACACCATTAGCGCTCCATCTTATATGGAGTATCGTGATTCTACAATTTAATTTGGAGGGGAAGTCCCGGCACTACAGAGACCCTTCTCTAGCTCATCTCTTCATCATGAACAACGTTCATTACATCGTTCAAAAGATAAAAGGATCGCCGGAGTTGCGAGAAATGATCGGAGATGTTTATCTGAAAAGACTTACCGGGAAGTATCGACAGGCGGCGACAAACTACGAGAGAACAACGTGGGTGAATGTGCTGTATTGCCTACGAAACGAAGGGTTGAATGTGGGGGGGAGCTTATCTTCCGGCCCTGCAAAGAGCCTAATTAGAGATAGATTCAAGACTTTCAACGCCATGTTCGAGGAGGTTCACAGGACACAATCATCATGGTTGATACCAGATTCTCAGCTGAGGGAGGAGCTACGCATATCCATAATTGAGAAGTTGATCCCAGCCTACAGGTCGTTTCTTGGCCTCCATGGCCACCACATAGAGAGTGGAAGACACCCCGAAAATTACATCAAATACTCGGTTGAGGAACTCGAAAATGCCATCTTGGATTTCTTTGAGGGTTGCTCTGTAACCCATAACTTGAGAAGGAGATCTCACTGA | 1833 | 47.79 | MEPSLELSQTPEQIILRWDSAAPEEVKDKMIFDSDREEIDRYLQAVDEIQRSMSSAPISDDHNKADSTMQIAMARLEDEFRHILSSHTTPIEVDSLTDPSPSSRSMSTSGSGVFEDENDDEPDLNEVQLDLTGSPSFGSSGRSSYRATSSIREIDLIPSDAVIDLRSIAERMISAGYLRECIQVYGSVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRGAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSSEKLFKILDLHDALTELIPDIDVIFESKSAEYIRIQATEIVSRLAEAVRGTLSEFENAVLREPSLHPVPGGTLHPLTRYVMNYVSLISDYKVTLDELIVSKPSTGSRYSADPSIPDMDFGELEGKTPLALHLIWSIVILQFNLEGKSRHYRDPSLAHLFIMNNVHYIVQKIKGSPELREMIGDVYLKRLTGKYRQAATNYERTTWVNVLYCLRNEGLNVGGSLSSGPAKSLIRDRFKTFNAMFEEVHRTQSSWLIPDSQLREELRISIIEKLIPAYRSFLGLHGHHIESGRHPENYIKYSVEELENAILDFFEGCSVTHNLRRRSH* | 611 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9618640 | 9620472 | + | Chy4G074740.1 | Chy04g00756 | 224655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy04g00756 | 610 | MobiDBLite | consensus disorder prediction | 90 | 144 | - | - | |
Chy04g00756 | 610 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 9 | 609 | IPR004140 | GO:0000145|GO:0006887 | |
Chy04g00756 | 610 | MobiDBLite | consensus disorder prediction | 90 | 113 | - | - | |
Chy04g00756 | 610 | Pfam | Exo70 exocyst complex subunit | 224 | 593 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Chy04g00756 | 610 | MobiDBLite | consensus disorder prediction | 129 | 144 | - | - | |
Chy04g00756 | 610 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 9 | 609 | - | - | |
Chy04g00756 | 610 | Gene3D | Exocyst complex component Exo70 | 130 | 606 | - | - | |
Chy04g00756 | 610 | Gene3D | Exocyst complex component Exo70 | 14 | 115 | - | - | |
Chy04g00756 | 610 | SUPERFAMILY | Cullin repeat-like | 12 | 597 | IPR016159 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy04g00756 | Chy-Chr4:9618640 | Chy12g01170 | Chy-Chr12:16583153 | 6.01E-155 | dispersed | |
Chy12g01498 | Chy-Chr12:18822797 | Chy04g00756 | Chy-Chr4:9618640 | 1.85E-94 | dispersed | |
Chy04g00756 | Chy-Chr4:9618640 | Chy11g01268 | Chy-Chr11:18902583 | 1.51E-108 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy04g00756 | K07195 | - | csv:101204229 | 1155.58 |