Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00760 ATGTCTCGAAGATCGACTAGGTTATTGGATAAGGCGAATAAACATTTTGAGAAAATCACAAGTAGTGTAACTACAAAATCATCTAGAAGTAACAGATATGTTGTATCTGAGGGAATCCTTAAAGCACATAGAAGGAGTCAAAAGTGGACACCAAATAATGAGGTTAAGCTAAATGAAGTTATGTTGTCTCCATCTTTTGAGCAATTAGAGGGAAACAAGAGAAAGACATACAATAAGAGGTCAATGGTCAAAAGAGCAACTGCTTCGAAGAATCTTAAGTCGGAGGAGGGTATCAACAAAAAAGGGAGTGGGAGATTAAGGAAGAGGGTGTATTATCAAAAAGTGGTTTTTGATGGTGGTGAATTTGAGGTTGGGGACGATGTTTATGTAAGGAGGAGAGAAGATGCAAGCTCTGATGATGAAGATCCTGAAGTTGAGGAGTGTAGAATGTGCTTTAAATCTGGAAATGCAATAATGATCGAGTGTGATGACTGTCTTGGTGGTTTTCATTTGAAGTGTTTGAAGCCTCCAATGAAGGTGATCCCTGAGGGGGATTGGATTTGTGGGTTTTGTGAGTCTGCCAAAATGGGCAAAGAGGTTCAATTGCCAAAGCCTCCGGAGGGTAAAAAACGGGTTAGGACAATGAGGGAGAAGCTTCTAGCAGGCGTTTTGTGGGCTGCTCATATTGAAAGTATATGGAAAGAAGTAACGGGTAACCATCACTGTAAGGTTAGATGGTATATAATCCCAGAAGAGACTGCAGCTGGAAGGCAACCGCATAACTTGAAGAGAGAGCTTTATTTAACTAATGATTTTGCAGATATTGAGATGGAATCGCTTCTTAGACTGTGTGAAGTCAAGAATCCGAAAGACTATTATAAAGCCAAGGAAGGGGATGATATATTTTTATGTGAGTATGAATATGACGTTCGTTGGCATAGTTTCAAGAGGTTGGCTGAAATTGATAAAGAACAGGATAGTGAAGCAGTTGATAGTGACACAGAGTGGAAGTTGGACCAGAATGTAGACTCTGATTCAGATGGTGACGTGGAATATGAAGAAGAGAGAGCACAAATTTTACTATCTCGAAACTACTCAAGCTCAACCCATGAATTAGCTGCAAATTCAAGGAAAGGACAATTTTGTGGACTACAAAAGATAGGAGCTAAGAAGATCCCAGAGCATACAAGATGTCATAAACAAACTGAATTGGAAAGAGCAAAGGCAACCCTCATGTTGGCGTCACTACCCAAGTCCCTACCGTGTAGAAATAAAGAAATTGAGGAGATAACTACGTTTATTGAAAGTGCTTTATGTGATGATCAATGCTTGGGTCGATGCTTGTACATCTATGGTGTTCCAGGAACAGGTAAGACCATGAGTGTGCTGTCGGTAATGAGAAACTTGCGGGCTAAAGTTGATACAGGAAATCTAAGGCCTCATTGCTTTGTGGAGGTTAATGGTCTAAAGCTGGCAGCACCAGAAAATATATACAGAGTTATACATGAAGCATTAACTGGGCATAGGGTTAATTGGAAAAAGGCGCTTCAGTTGTTGACCAAACGTTTTTCAGACGTAAATAGTTACAGGGATGATGAGCGACCTTGCATTCTGCTCATTGATGAACTTGATCTTCTTGTAACAAGAAATCAGTCAATTCTATACAACATTCTCGATTGGCCTACAAAGCCACAAGCCAAGTTGATTGTGATAGGAATTGCAAATACCATGGACCTACCAGAGAAGTTGCTTCCTCGAATTTCAAGCCGAATGGGTATTGAAAGGCTTTGTTTTGGCCCCTATAACTATCAGCAACTTCAAGAAATTATTTTGAGCCGGCTTGAAGGAATCAATGCATTTGAGAAACAAGCTATTGAATTTGCATCGAGAAAGGTAGCTGCTATTTCAGGAGATGCACGTCGTGCTTTGGAGATATGTAGGCGTGCAGCTGAAATTACGGATTATCATTTAAAGAAGCATCATATGAAGCAGCTGAGTTTGATTTCCAACACTGCGAAAACACATGTTGGAATAGCTGAGGTGGAAACAGCGATCCAAGAAATGTTTCAAGCACCTCATATGCAAGTGATGAAGAGTTGTTCTAAGCAGAGCAAGATCTTCTTGACAGCGATGGTGCATGACTATTATAAAACAGGGTTGGGTGAAGAAACCTTTGAAAAGCTTGCCATGACTGTCTCAAATCTTTGTACAAGCAATGGAGAGGAATTTCCTGGATATGATGCTCTCCTGAAAGTTGGCTGTAGGCTTGGTGAGTGCAGAATTATTTTATGTGAATCAGGGGCTAAACACCGGTTGCAAAAGTTACAGCTTAATGTTCCAAGTGATGACGTCTCATTTGCATTGAAAGATAGTAAGGATATACCTTGGTTGGCTAAGACTGCAGTTGAGAGTTTTGATGTGTTTGTACGTGCTGGGGGAATGAACAGGGCATATCATGTGGATTTCCTTGAACCAATTTCAACTAGGCCCGGATACGGCTGCAGGTGCTCCAGGAACGAATGCTCTCTTGAATGGTTTGGAAATCTAATCCGGAGAAGGAATTTTACAAAGAACTTTTCTGGGTGGAGAGGAGGTTCTAGTCATGAGGCCACTGTCACCAACACTTACGCCAGAGGGTCTGTGGGGGGAGGCCAAAGTGTGTTCGGGACCTTGCCATCTATCAGAGTTGGCAAATGGTTTACATTAGCAGATATTCTTGCAGCGACAGATAACTTTGATGAAGCTCTGATGATTGGAGTTGGGGGTTTTGGTAAGGTCTACAGAGGGGAGATTGATGATGGTACTCTTGTGGCAATCAAGAGAATAAAGCCCCAGTCTCAGCAGGTACTTGCTGAGTTCGAAACTGAGATCGAAATGCTTTCTAAACTTAGGCATAGACATCTGGTGTCAATGATCGGCTTTTGCGACGAGCAAAGGGAAATGATCTTGGTTTACGAATATCTGGCGAATGGCACCCTTAGAAGCCAGTCTTTGGTAAGATTGGAAGTTTGCATTGGTGCAGCCAGGGGACTCCATTATCTTCACACAGGAGCTGAGAGAGGAATAATCCACAGAGATGTGAAGACGACTAACATACTCTTGGATGAAAATTTTGTTGCAAAAATGTCTGATTTTGGTCTTTCAAAAACAGGTCCTTCTTTGGATCACACTCATGTTAGTACTGCAGTTAAGGGCAGCTTCGGCTACCTCAATCTGAAGTACTTCAGGCGTCAGCAGCTGAGTGAAAAATCTGATGTTTATTCTTTTGGTGTGGTATTGTTAGAAGTTGTTTGTGCAAGAGCTGTTATAAACCCAACTTTGCCTAAGGATCAGATAAATCTGGCAGAATGGGCAATGAAATGGCAACGAAAAAAGTTGTTGCACACCATCATAGATCCACATCTTAAAGACAAATATTGTCCCGAATCTCTAAAAACATTTGGAGAAATGGCAGAAAAATGCCTTGCTGGTGAAGGGAAGATTTGTCCAACAATGGGCGAAGTTCTATGGCACCTAGAATATTCTCTGCAACGCCATGATGCTTGGATCTGCACTAATGATGCACAAAGTTCTTGCGCAGTAAACTCAGAAGGAGCAGAAGCTGAGGAACAGAGGCTAGATCATGATGGGGAAGAGGAATGCTCCAACATGAAAGCTTCAACTCCAACTGATCACTCATCCTAA 3684 41.61 MSRRSTRLLDKANKHFEKITSSVTTKSSRSNRYVVSEGILKAHRRSQKWTPNNEVKLNEVMLSPSFEQLEGNKRKTYNKRSMVKRATASKNLKSEEGINKKGSGRLRKRVYYQKVVFDGGEFEVGDDVYVRRREDASSDDEDPEVEECRMCFKSGNAIMIECDDCLGGFHLKCLKPPMKVIPEGDWICGFCESAKMGKEVQLPKPPEGKKRVRTMREKLLAGVLWAAHIESIWKEVTGNHHCKVRWYIIPEETAAGRQPHNLKRELYLTNDFADIEMESLLRLCEVKNPKDYYKAKEGDDIFLCEYEYDVRWHSFKRLAEIDKEQDSEAVDSDTEWKLDQNVDSDSDGDVEYEEERAQILLSRNYSSSTHELAANSRKGQFCGLQKIGAKKIPEHTRCHKQTELERAKATLMLASLPKSLPCRNKEIEEITTFIESALCDDQCLGRCLYIYGVPGTGKTMSVLSVMRNLRAKVDTGNLRPHCFVEVNGLKLAAPENIYRVIHEALTGHRVNWKKALQLLTKRFSDVNSYRDDERPCILLIDELDLLVTRNQSILYNILDWPTKPQAKLIVIGIANTMDLPEKLLPRISSRMGIERLCFGPYNYQQLQEIILSRLEGINAFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYHLKKHHMKQLSLISNTAKTHVGIAEVETAIQEMFQAPHMQVMKSCSKQSKIFLTAMVHDYYKTGLGEETFEKLAMTVSNLCTSNGEEFPGYDALLKVGCRLGECRIILCESGAKHRLQKLQLNVPSDDVSFALKDSKDIPWLAKTAVESFDVFVRAGGMNRAYHVDFLEPISTRPGYGCRCSRNECSLEWFGNLIRRRNFTKNFSGWRGGSSHEATVTNTYARGSVGGGQSVFGTLPSIRVGKWFTLADILAATDNFDEALMIGVGGFGKVYRGEIDDGTLVAIKRIKPQSQQVLAEFETEIEMLSKLRHRHLVSMIGFCDEQREMILVYEYLANGTLRSQSLVRLEVCIGAARGLHYLHTGAERGIIHRDVKTTNILLDENFVAKMSDFGLSKTGPSLDHTHVSTAVKGSFGYLNLKYFRRQQLSEKSDVYSFGVVLLEVVCARAVINPTLPKDQINLAEWAMKWQRKKLLHTIIDPHLKDKYCPESLKTFGEMAEKCLAGEGKICPTMGEVLWHLEYSLQRHDAWICTNDAQSSCAVNSEGAEAEEQRLDHDGEEECSNMKASTPTDHSS* 1228
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 9669583 9674137 + Chy4G074780.1 Chy04g00760 224659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00760 1227 MobiDBLite consensus disorder prediction 1200 1215 - -
Chy04g00760 1227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 139 212 IPR013083 -
Chy04g00760 1227 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1022 1034 IPR008271 GO:0004672|GO:0006468
Chy04g00760 1227 ProSiteProfiles Zinc finger PHD-type profile. 145 194 IPR019787 -
Chy04g00760 1227 MobiDBLite consensus disorder prediction 329 349 - -
Chy04g00760 1227 Gene3D - 597 685 - -
Chy04g00760 1227 Gene3D - 400 596 IPR027417 -
Chy04g00760 1227 SMART serkin_6 912 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00760 1227 Pfam ATPase family associated with various cellular activities (AAA) 448 594 IPR003959 GO:0005524|GO:0016887
Chy04g00760 1227 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 93 797 - -
Chy04g00760 1227 Pfam PHD-finger 148 193 IPR019787 -
Chy04g00760 1227 Pfam BAH domain 228 316 IPR001025 GO:0003682
Chy04g00760 1227 MobiDBLite consensus disorder prediction 329 344 - -
Chy04g00760 1227 Pfam Protein tyrosine and serine/threonine kinase 917 1101 IPR001245 GO:0004672|GO:0006468
Chy04g00760 1227 SUPERFAMILY Protein kinase-like (PK-like) 891 1174 IPR011009 -
Chy04g00760 1227 Gene3D Phosphorylase Kinase; domain 1 892 985 - -
Chy04g00760 1227 Gene3D Transferase(Phosphotransferase) domain 1 986 1197 - -
Chy04g00760 1227 Gene3D - 87 334 IPR043151 -
Chy04g00760 1227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 656 IPR027417 -
Chy04g00760 1227 SMART PHD_3 147 192 IPR001965 -
Chy04g00760 1227 ProSiteProfiles BAH domain profile. 204 319 IPR001025 GO:0003682
Chy04g00760 1227 SMART AAA_5 444 597 IPR003593 -
Chy04g00760 1227 SMART BAH_4 179 319 IPR001025 GO:0003682
Chy04g00760 1227 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 93 797 IPR020793 -
Chy04g00760 1227 ProSiteProfiles Protein kinase domain profile. 912 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy04g00760 1227 MobiDBLite consensus disorder prediction 1195 1227 - -
Chy04g00760 1227 Pfam AAA lid domain 621 659 IPR041083 -
Chy04g00760 1227 SUPERFAMILY FYVE/PHD zinc finger 134 197 IPR011011 -
Chy04g00760 1227 ProSitePatterns Zinc finger PHD-type signature. 148 191 IPR019786 -
Chy04g00760 1227 ProSitePatterns Protein kinases ATP-binding region signature. 918 940 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00078 Chy-Chr2:527025 Chy04g00760 Chy-Chr4:9669583 0 dispersed
Chy02g00079 Chy-Chr2:528214 Chy04g00760 Chy-Chr4:9669583 5.01E-71 dispersed
Chy02g00080 Chy-Chr2:528578 Chy04g00760 Chy-Chr4:9669583 6.83E-133 dispersed
Chy04g00760 Chy-Chr4:9669583 Chy10g00727 Chy-Chr10:13548017 2.45E-111 dispersed
Chy11g01344 Chy-Chr11:19699618 Chy04g00760 Chy-Chr4:9669583 5.58E-29 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17838 PF07714 PK_Tyr_Ser-Thr 1.70E-37 CL0016 Chy TR
71191 PF07714 PK_Tyr_Ser-Thr 1.70E-37 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00760 K02603 - csv:101214082 1573.91