Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00794 ATGGCACGGCTCATAAACAATCAGTTCAGTTTTGAAACGCCAGAAAATGAGGCTGTTATCACTAAAAAAATTCCTCGCTCTGAACGCACCAACAAGTATCCTAATTGGTATTCACCAGATACAGGAATTTGTCATAGTGTCCATGGCTACAGAAAACTTCCCTCTGATCCATTTCTTGACGTTGTCTCCTTCATCTTCTCCTTCCAGTTCCAACACAATGGACATTCAGCTCTCATTGATTCCTCAACTGGAAATTCAATATCTTACAAAGAATTGTTTCCTATGGTAAAATCCTTGGCTTCTGGTCTCCATAATTTAGGTATATCACAAGGGGATGTAGTTTTGCTTATGTTACCAAATTCAATTTTCTTTCCCATTATTATTTTGGGTGCCCTGTATTTGGGAGCTGTTGTTACAACCATGTTTCCTCAAAGCAGCTCGTCTGAAATCAAGAAACGAATCACTGAATGCAATGTGCATTTGGCATTTACAATAACTCAGAAAATCAAGAATTTTGAAGCATTGGGAATTAAGACAATTGGTGTACCAGAAAATACGAACTTCAACTTGACGAGGCCTATGGGATTTTCTTCTTTTTATGAACTTATTTTAGGTGGTTCTGATTTGATTAAAAAACCAGTGATCAGACAAGAAGATACAGCTGCTATATTGTTTTCTTCGGGTACTACTGGAGCGAGCAAAGGGGTTATGTTATCACATAGAAATTTTATATCTACCATCAAGCTTTTCGTTCGGTTTGAAGCTTCACAGTATGAATACTTGCCTACAAAGAATGTGTATTTGGCTGCTGTACCAATGTTTCATATCTATGGTCTCTCCATTTTTGTGATGGGATTAATGTCATTGGGGTCTAGTGTTGTTGTAATGAGCAAATTTGATGTCAAAGATGTGGTCAAGGCCATTGATAGATTTAAGGTCACACATTTTCCAGTTGTTCCACCTATATTGACAGCTTTGGCTAGGACTGTAGAGAAAATTGGTGTGCATAGATTTCGAAGTTTGAAACAAGTTTCTTGTGGGGCTGCTGCTTCAAGCAAGAAGACCATAGATGATTTTGTGCACGCTCTCCCTCATGTTGACTTCATTCAGGGATATGGCATGACAGAGTCCACAGCTGTAGGAACCCGTGGTTTCAATACCAAAAATGCTAGAAATTATTTGTCAGTGGGACTTTTAGCTCCAAACACAGAAGCTAAGGTCGTCGATTGGGTTACTGGATCTTCCATGCCTCCTGGTAAAACCGGCGAACTTTTATTACGTGGACCTGGTTCAATGAAAGGGTACTTGAATAATCCAGAGGCAACAACATCCACAATAGACCAAGAAAGTTGGCTACATACGGGAGACATTGTCTACTTTGACCGAGATGGATACTTGTATGTTGTTGATCGCTTGAAGGAGGTTATAAAGTATAAAGGCTTTCAGATTGCACCTACAGATTTAGAAGCTGTAGTGATCACACATCCTGAAGTTCTTGATACTGCAGTAGCGGCGGCTAAAGATGAAGAATGTGGTGAAATTCCAGTGGCATTTGTGGTAAAGAAGCCAGGAAGTGCACTCTCACAAAAAGATGTTGTTGATTATGTTGCTCAACAGGTTGCCCCATATAAAAAAGTTAGAAAAGTGATTTTTACGGAATCAATACCAAAGTCTGCTGCTGGGAAAGTACTTCGAAGGGAACTACAGAAACACTTCCCAGCTTCTAAATTATGA 1734 39.45 MARLINNQFSFETPENEAVITKKIPRSERTNKYPNWYSPDTGICHSVHGYRKLPSDPFLDVVSFIFSFQFQHNGHSALIDSSTGNSISYKELFPMVKSLASGLHNLGISQGDVVLLMLPNSIFFPIIILGALYLGAVVTTMFPQSSSSEIKKRITECNVHLAFTITQKIKNFEALGIKTIGVPENTNFNLTRPMGFSSFYELILGGSDLIKKPVIRQEDTAAILFSSGTTGASKGVMLSHRNFISTIKLFVRFEASQYEYLPTKNVYLAAVPMFHIYGLSIFVMGLMSLGSSVVVMSKFDVKDVVKAIDRFKVTHFPVVPPILTALARTVEKIGVHRFRSLKQVSCGAAASSKKTIDDFVHALPHVDFIQGYGMTESTAVGTRGFNTKNARNYLSVGLLAPNTEAKVVDWVTGSSMPPGKTGELLLRGPGSMKGYLNNPEATTSTIDQESWLHTGDIVYFDRDGYLYVVDRLKEVIKYKGFQIAPTDLEAVVITHPEVLDTAVAAAKDEECGEIPVAFVVKKPGSALSQKDVVDYVAQQVAPYKKVRKVIFTESIPKSAAGKVLRRELQKHFPASKL* 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10206486 10210551 - Chy4G075120.1 Chy04g00794 224693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00794 577 Pfam AMP-binding enzyme C-terminal domain 488 562 IPR025110 -
Chy04g00794 577 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 28 571 - -
Chy04g00794 577 CDD 4CL 53 568 - -
Chy04g00794 577 SUPERFAMILY Acetyl-CoA synthetase-like 39 572 - -
Chy04g00794 577 ProSitePatterns Putative AMP-binding domain signature. 223 234 IPR020845 -
Chy04g00794 577 Gene3D - 474 574 IPR045851 -
Chy04g00794 577 Gene3D - 50 473 IPR042099 -
Chy04g00794 577 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 28 571 - -
Chy04g00794 577 Pfam AMP-binding enzyme 71 478 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00794 Chy-Chr4:10206486 Chy07g00376 Chy-Chr7:3036561 4.06E-156 dispersed
Chy11g01686 Chy-Chr11:23312304 Chy04g00794 Chy-Chr4:10206486 1.88E-21 dispersed
Chy04g00794 Chy-Chr4:10206486 Chy02g02216 Chy-Chr2:26272015 4.68E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00794 K01904 - csv:101219578 1102.81