Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy04g00803 ATGTCCCTCCTTAGTAGATTCTTTTACCGAAGACCTCCAGATGGGTTGCTGGAATTTGTTGAACGAGTCTATATTTTTGATTCGTGTTTTTCGACTGAAGCTTTGCCTGATGGTATGTACCAAATATATCTGCATGAAATCATTAATGAATTACATGAAGAATTCCCGGACTCTTCCTTCCTTGCGTTTAATTTTCGTGAAGGGGAGAAAAGGAGCCAATTTGCAGAAGTGTTGTGTGCGTATGACGTCACTGTCATGGATTATCCTCGACAATATGAAGGTTGTCCTCTTCTTCCACTGTCGTTGATTCAGCACTTCCTCCGTGTTTGTGAAAGTTGGCTTCTGCTTGGTAACCAACAAAATGTTATTCTTCTTCACTGTGAGAGGGGAGGTTGGCCTCTCTTGGCATTCCTTTTGGCTAGCTTTTTGATTTTTAGAAAAATGCACAGTGGTGAGAGGAAAACTCTTGAAATTGTACACCGAGAAGCTCCCAAAGGGTTTTTGCAGCTCTTGTCCCCACTAAATCCATTTCCATCTCAGCTCCGTTACTTGCAATATGTAGCAAGGAGAAATATAGTCTCTGAGTGGCCACCACCTGAGCGAGCACTCTCTTTAGATTGTGTAATTCTTCGTGGCGTTCCAGGTTTTGATGCTCAGAATGGCTGCAGACCAGTCATTCGTATTTTTGGGAGGAATCTTTTTAGTAAGGGTGGGCTTTCCACGAAGATGCTTTTCTCTATGCCCAAGAAGAACAAGGCCCTCCGTCACTACCATCAGACAGACTGTGATGTGATTAAAATAGACGTACAGTGCTTGGTTCAAGGAGATGTAGTGTTGGAGTGTTCACATTTGGAATCGGAACCAGAAAGAGAAGTTATGATGTTTCGTATTATGTTCAATACAGCATTTATTAGATCAAACATACTAATGCTAACTTCTGAAAATTTGGATATTCTTTGGGATTCAAAGGAGCGTTATCCAAAAGGCTTTCGAGCTGAGGTTTTGTTTGGGGAGATGGAAAACATCTCCCCTCCAAGGGCTCCAACCTCCATTTTGAATGGTGAAGAGAAAGGTGGATTGCCAATTGAAGCTTTTTCCAGGGTTCAAGAACTTTTTAGTGGTGTCGAGTGGATTGATAACAACGATGATGCTGCCTTGTGGCTACTTAAGAATCTTTCTGCCTTGAGTGATGTGAAAGAATTGTCAAGATTGCAAAATAAAACAAGTTCATACTCCTCACCAATAGATTCTGAAGAGGAAAATAATACATCTAGCACTGCCGATAGTTCAGATGAAGTGTTTGATATTATTACAAAGCCTTTTGTGGATCCAACTTCTACCAACTTTACAATTCCGGCCACGGTACATTCTTCTGAATTATTGTCTGACAAGATTGGTGCTAATGAAGTGAATATTTCATCAGAGTCTCCTCAATCTTCTGATGGATTTCAAGACAAGATATTTTCAAATAAAGAACCTTTACCCTCTTCATCACCTCTGTTGCCTCCATCTAATCTACCATCTACTGATGCTAGTGGGAAACTTGACTCAAATAATATGACACCCAATGTTAAAGTGATTCCTCCACCACCACCGCCGCCACCTTTTTCTCTATCACATAACAAGCCTCATGTAGAAACTTCCTCTAGTTCAGATTCGACCACTGTAACAATGCATGTGAGACCCCCTCCACCTCCTCCACCTCCACCTCAGTATCCTACTATTAACAATCCTGTTACAACGACTGATTCACTTTCACATGTTCCTAAATCTTCTGGTGCACCCCCACCCCCACCTCCACCTTTAGTTCCAAAATCTTCTAGTGCTCCTTCACCTCCACCTCCACCTCCACCCCCAATTGCAAAATCTTCTGGTGCTCCCCCACCTCCGCCTCCTCCCCCTCCAGTAGTCCTGAAATCTTCTAGTGCTCCTCCACCTCCACCTCCGCATACAGTTCCGAAATCTTCTAGTGTTCCTCTGCCCCCTCCCCAGCCACCGCCTCCGCCTCCGCCTCCAGTTTCAAAATCTTCTAGTGCTCCTCCACCTCCACCTCCTCCTCCGCCCCTAAAATCTTCTAGTGCTCCCCCACCTCCTCCAACTCCGCCTCTAAAATTTTCTAGTGCTCCTCCACCTCCACCTCCTCCTCCGTTTTCAAAATTCTCTAGCGCTCCTCCGCCTCCGCCTCCACCTCCATTTCCAAAACTTTCTGGTGCTCCTCCACCTCCACCTCCACCTCCACCTCCTCCTCCTCCACAATCAAATAGTGGTGCACCAGTTCCACCTCCTCCCCCACCATCGAAACCTCCCAGTGTTGAGCTGCCAAGTCATGGTGCTAAATCAACTAGACCTCCTCCACCTCCTCCACCAGCAAAGCCCTTCAATGCCAATTCTCTGACAAGTCAAGGTGCTACACCAATACCACCCCCTCCCCCCGGATCAAGAGAATCAAATGTACCACCGCCGCTGCTGCCTTCTGCTGGAAGAGGCAAAGCTTCCCTGGGATCAACAGCTCAAGGAAGAGGCCGAGTTGCCACAGGAGTTGTAAATGCTCCAAAAAAAAACACCTTAAAACCATTACACTGGGTGAAAGTTACTCGAGCAATGCAAGGGAGTTTATGGGCTGACTCACAAAAGCAGGAAAATCAATCAAGGGCCCCAGAAATAGACATCTCTGAACTTGAAAGTCTATTCTCAGCCGCTTCTGCTTCTGATGGAAGTGGCAGTAAAGGTGGAGGTCGACGAGGTTCCAACATCAATAAACCTGAAAAAGTGCAACTGATTGACCTGCGGAGAGCATACAACTGTGAGATAATGCTCTCAAAAATAAAGATTCCCTTACCGGATATGATAAATTCAGTTCTTGCATTGGATTCTTCTGCTCTTGATATTGACCAGGTTGAGAATCTCATCAAGTTTTGTCCTACTAGGGAAGAGATGGAAACGTTGAAGGGTTATACAGGTGACAGAGAAATGCTCGGAAAGTGTGAGCAGTTTTTTCTCGAGCTATTGAAGGTCCCTCGAATAGAGTCCAAGTTACGAGTATTTGCTTTCAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATATCATTTGAGCACAATAAACGATGCTACAAGAGAGGTCAAAGAATCTGCAAAATTGCGTCAGATAATGCAAACTATTCTTACACTGGGAAATGCATTAAACCAGGGTACTGCTCGAGGCTCCGCTATAGGTTTTAAGTTGGACAGCCTCCTTAAATTGTCTGACACTCGGGCAAGAAACAACAAAATGACTTTGATGCATTATCTATGTAAGCTCATTGCAGAGAAAATGCCAGAGTTACTTGATTTTGACAAGGACCTTGTTCATTTAGAAGCTGCCTCTAAGATTCAATTGAAAGCATTGGCCGAGGAAATGCAAGCAGTAAGTAAAGGTCTTGAAAAGGTGGAGCAAGAGCTAACTGCCTCAGAAAACGACGGTGTGATCTCTATTGGTTTCCAAAAGGTGCTGAAAAAGTTTTTGGATACGGCTGAAGCTGAAGTAAGGGCACTTATCTCCTTATATTCTGAAGTGGGGAGAAATGCGGACTCTCTATCACAGTACTTTGGCGAGGATCCAGCTCGGTGCCCTTTTGAGCAAGTGACTCAAATTTTGATAGTCTTCGTCAAGATGTTCAAGAAGTCACGAGAAGAAAATGAAAGGCAGGCTGATGCTGAAAAGAAAAAACTAGAGAAGGAAGCCATGAAAGAAAGAAGTTCAGTTAAAGCAAAGTGA 3759 44.21 MSLLSRFFYRRPPDGLLEFVERVYIFDSCFSTEALPDGMYQIYLHEIINELHEEFPDSSFLAFNFREGEKRSQFAEVLCAYDVTVMDYPRQYEGCPLLPLSLIQHFLRVCESWLLLGNQQNVILLHCERGGWPLLAFLLASFLIFRKMHSGERKTLEIVHREAPKGFLQLLSPLNPFPSQLRYLQYVARRNIVSEWPPPERALSLDCVILRGVPGFDAQNGCRPVIRIFGRNLFSKGGLSTKMLFSMPKKNKALRHYHQTDCDVIKIDVQCLVQGDVVLECSHLESEPEREVMMFRIMFNTAFIRSNILMLTSENLDILWDSKERYPKGFRAEVLFGEMENISPPRAPTSILNGEEKGGLPIEAFSRVQELFSGVEWIDNNDDAALWLLKNLSALSDVKELSRLQNKTSSYSSPIDSEEENNTSSTADSSDEVFDIITKPFVDPTSTNFTIPATVHSSELLSDKIGANEVNISSESPQSSDGFQDKIFSNKEPLPSSSPLLPPSNLPSTDASGKLDSNNMTPNVKVIPPPPPPPPFSLSHNKPHVETSSSSDSTTVTMHVRPPPPPPPPPQYPTINNPVTTTDSLSHVPKSSGAPPPPPPPLVPKSSSAPSPPPPPPPPIAKSSGAPPPPPPPPPVVLKSSSAPPPPPPHTVPKSSSVPLPPPQPPPPPPPPVSKSSSAPPPPPPPPPLKSSSAPPPPPTPPLKFSSAPPPPPPPPFSKFSSAPPPPPPPPFPKLSGAPPPPPPPPPPPPPQSNSGAPVPPPPPPSKPPSVELPSHGAKSTRPPPPPPPAKPFNANSLTSQGATPIPPPPPGSRESNVPPPLLPSAGRGKASLGSTAQGRGRVATGVVNAPKKNTLKPLHWVKVTRAMQGSLWADSQKQENQSRAPEIDISELESLFSAASASDGSGSKGGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMINSVLALDSSALDIDQVENLIKFCPTREEMETLKGYTGDREMLGKCEQFFLELLKVPRIESKLRVFAFKITFSSQVNDLRYHLSTINDATREVKESAKLRQIMQTILTLGNALNQGTARGSAIGFKLDSLLKLSDTRARNNKMTLMHYLCKLIAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGVISIGFQKVLKKFLDTAEAEVRALISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILIVFVKMFKKSREENERQADAEKKKLEKEAMKERSSVKAK* 1253
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10422737 10431204 + Chy4G075210.1 Chy04g00803 224702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy04g00803 1252 MobiDBLite consensus disorder prediction 899 919 - -
Chy04g00803 1252 SMART PTEN_C2_2 198 338 IPR014020 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 524 539 - -
Chy04g00803 1252 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 472 495 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 591 771 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 503 523 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 899 913 - -
Chy04g00803 1252 Coils Coil 1221 1248 - -
Chy04g00803 1252 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 779 793 - -
Chy04g00803 1252 Gene3D - 197 342 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 803 818 - -
Chy04g00803 1252 Gene3D Formin, FH2 domain 847 1232 IPR042201 -
Chy04g00803 1252 Coils Coil 1127 1154 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 472 851 - -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 559 575 - -
Chy04g00803 1252 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 1223 1252 - -
Chy04g00803 1252 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Chy04g00803 1252 Pfam Formin Homology 2 Domain 851 1221 IPR015425 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 406 430 - -
Chy04g00803 1252 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 19 187 IPR029021 -
Chy04g00803 1252 SMART it6_source 557 1252 IPR015425 -
Chy04g00803 1252 ProSiteProfiles Formin homology-2 (FH2) domain profile. 846 1246 IPR015425 -
Chy04g00803 1252 MobiDBLite consensus disorder prediction 541 558 - -
Chy04g00803 1252 SUPERFAMILY Formin homology 2 domain (FH2 domain) 859 1240 - -
Chy04g00803 1252 PANTHER FORMIN-J 742 1248 - -
Chy04g00803 1252 PANTHER FORMIN-J 1 648 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy04g00803 Chy-Chr4:10422737 Chy07g00331 Chy-Chr7:2686037 4.84E-168 dispersed
Chy04g00803 Chy-Chr4:10422737 Chy02g02115 Chy-Chr2:25463736 1.81E-141 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy04g00803 - - csv:101217517 1104.35